Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03606 ATGGTTGTACTTTTCAATTTACAGTTTTCTCGGTGGACTTTCTACAAACACCTTACGCCTCGGAAATTCACAACTCTCTGTCACCACAATTCCACCGCTAATTTATCCCATTTCGTAACCCTAACTTCCCGCCAGAAAGATCAAATTCATCTCTATGTTGACACACTTCTTCAATGGAACAAGCGCATGAATCTAACTGCTGTCAAAGAAGTTAATGAAGTTATGGAAAGACACATTGAGGACTCCCTCGCGATTTTGCCTCCTTTAAGCAAACATTATATCAATCACTGCAGCGGCAATTCCATCGATAAGCTTAAACTTGTCGATGTTGGAACTGGTGCTGGGCTTCCTGGAGTAGTTTTGGCCATAGCTCGACCAGATTGGGATGTAACGTTGATGGAGTCTATGAACAAGCGGTGTGTCTTCTTGGAGCATGTTGTCAGTGTTATTGGTTCCTCTAATGTTCAAATTGTAAGAGGAAGAGCAGAGAGTTTGGGGCAGAATCTTTGCTTCAGAGAGAAATTTGACATAGCAGTAGCCAGGGCAGTTGCAGAGACGAGAATATTAGCTGAGTATTGCCTTCCGTTGGTTCGTGTTGGGGGAATGTTTATTGCTGCCAAGGGTCATGATCCTGAGGATGAAGTTAAGAAAGCTGAAAGCGCCATCAAGAAAATGGGTGCATCACTATTGCAAGTATGCTCAGTGGAATCGCAAAGCCCATATGGTCAGCGTACGGCTGTCATATGTCTTAAGGATCATCCCACGCCAATGAAATATCCCCGTGGTCCCGGTACACCAGCTAAAGAACCATTGAAATGGAAAGCAGTCAAGGCACCCCCCTTCTCTGTCTCAGCATTTTCAATATTCTGCCAAGTTTTCAAAGCAATAGCTTGA 894 0.4396 MVVLFNLQFSRWTFYKHLTPRKFTTLCHHNSTANLSHFVTLTSRQKDQIHLYVDTLLQWNKRMNLTAVKEVNEVMERHIEDSLAILPPLSKHYINHCSGNSIDKLKLVDVGTGAGLPGVVLAIARPDWDVTLMESMNKRCVFLEHVVSVIGSSNVQIVRGRAESLGQNLCFREKFDIAVARAVAETRILAEYCLPLVRVGGMFIAAKGHDPEDEVKKAESAIKKMGASLLQVCSVESQSPYGQRTAVICLKDHPTPMKYPRGPGTPAKEPLKWKAVKAPPFSVSAFSIFCQVFKAIA 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03606 297 Gene3D Vaccinia Virus protein VP39 22 272 IPR029063 -
Tsu04g03606 297 TIGRFAM rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 51 243 IPR003682 GO:0005737|GO:0006364|GO:0008649
Tsu04g03606 297 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 1 271 IPR003682 GO:0005737|GO:0006364|GO:0008649
Tsu04g03606 297 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 36 272 IPR029063 -
Tsu04g03606 297 Pfam rRNA small subunit methyltransferase G 46 236 IPR003682 GO:0005737|GO:0006364|GO:0008649
Tsu04g03606 297 Hamap Ribosomal RNA small subunit methyltransferase G [rsmG]. 38 248 IPR003682 GO:0005737|GO:0006364|GO:0008649
Tsu04g03606 297 CDD AdoMet_MTases 106 201 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03606 K03501 - gmx:100818428 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03606 04 45134011 45138431 Tsu04g03606 04 45134011 45138431 ECH