Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03605 ATGGAAAAGAAGCGGAAAAGGAATCAAAACGCGGAGCAGCGCGACGGCGATCAAAAGGCAAAGTCGGTTCCGGTGGCCGAGAATCAGAAGCAGCAACCATTCCCTTCACACAGTGGACCCACTCCACAAGAATGCCTCGAAATACGAGACACACTCTTATCCCTCCACGGTCTACCACCAGAACTCGCCAAATACCGCAAATCTCAATCAACCGACGACACCGTCAATCAAGAACCACCGGAAACCGTTCTCGACGGTTTAGTCCGAACCATACTCTCACAGAACACTACAGAAAACAATTCTCAGAAAGCTTTCATTTCTCTCAAATCATTATTTCCAACATGGGAACATGTACATGATGCTGAGAGTAAGGATTTGGAGAATGCTATTCGATGTGGTGGTTTAGCACCGACTAAAGCTTCGTGTATTAAGAATTTGTTGCGTTGTTTGTTAGAGAGAAAGGGGAAAATGTGTTTGGAGTATTTAAGAGATTTGTCTGTTGATCAAGTTAAGGCTGAGTTGTCTGTTTTCAAAGGAATTGGTGCCAAAACAGTCTCTTGTGTGTTGCTGTTCAACCTTCAGCTCGATGATTTTCCCGTGGACACTCATATATTTGAGATTGCGAAAACCATCGGTTGGGTACCAGCTGCTGCTGACAGAAACAAGACATACCTTCATCTAAACCAAAGGATCCCGGATGAACTTAAATTTGACCTAAATTGCCTTCTGTATACTCATGGGAAGCTCTGCAGTAAATGCTCCAGTAAAAGGGGCAACAAGCAACAGAAGAAAAAAGAGCAACAGAAGAAATCCAATGACGACTCTTGTcctttattaaattattataaagagtcagtttga 861 0.4216 MEKKRKRNQNAEQRDGDQKAKSVPVAENQKQQPFPSHSGPTPQECLEIRDTLLSLHGLPPELAKYRKSQSTDDTVNQEPPETVLDGLVRTILSQNTTENNSQKAFISLKSLFPTWEHVHDAESKDLENAIRCGGLAPTKASCIKNLLRCLLERKGKMCLEYLRDLSVDQVKAELSVFKGIGAKTVSCVLLFNLQLDDFPVDTHIFEIAKTIGWVPAAADRNKTYLHLNQRIPDELKFDLNCLLYTHGKLCSKCSSKRGNKQQKKKEQQKKSNDDSCPLLNYYKESV 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03605 286 MobiDBLite consensus disorder prediction 24 39 - -
Tsu04g03605 286 MobiDBLite consensus disorder prediction 255 276 - -
Tsu04g03605 286 Pfam HhH-GPD superfamily base excision DNA repair protein 88 231 IPR003265 GO:0006284
Tsu04g03605 286 CDD ENDO3c 87 247 IPR003265 GO:0006284
Tsu04g03605 286 SMART endo3end 92 249 IPR003265 GO:0006284
Tsu04g03605 286 MobiDBLite consensus disorder prediction 1 21 - -
Tsu04g03605 286 MobiDBLite consensus disorder prediction 1 43 - -
Tsu04g03605 286 Gene3D Hypothetical protein; domain 2 81 199 - -
Tsu04g03605 286 Gene3D - 200 250 IPR023170 -
Tsu04g03605 286 SUPERFAMILY DNA-glycosylase 80 258 IPR011257 GO:0003824|GO:0006281
Tsu04g03605 286 PANTHER - 3 284 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03605 K10773 - gmx:100802952 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03605 04 45118094 45120670 Tsu04g03605 04 45118094 45120670 ECH