Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03587 atggcttCTACTCTGCCAATGTCAAATATTGTTGGAATTCCAcaatttcttcacaaatatCAATCACAAGTCAATTTATCCAAATATGCAGCTAGACAACAAAGACTCAAGACAAAGAAAATTACTTGCATCAactcagagccacatttgcatAGGCTGAGCCAAAATGGAAGAACAATACCCCAAGAGATTAAGAACATTGGTTCAGGAACATGGGAATCAATGGAGGGTCTACTTCATTGCTCTGCAAATTCTGTTCCTTTGTCTCCAATCAACTTCCTTGAGAGAGCAGCAAAGGTTTGCAGAGACAGAACATCTGTTGTGTATGGTTCTTTGAACTATAATTGGGGTCAAACTCATCAACGTTGTCTCAAACTTGCTTCTTCTCTAGCCCAATTAGGAGTTTCTCGTGGGGATGTGGTTGCCACACTAGCTCCTAATATCCCTTCAATGTATGAGTTGCATTTCGCAGTACCAATGGCTGGAGCCATTCTATGTACTCTTAATTCACGCCTAGATGCAAATATGGTTTCAGTCCTATTGGAACATTCACAAGCAAAGGTTTTTTTTGTGGACTACCAATTACTTGATATCGCTCGAGGAGCATTGGACCTCCTAACCGAAAGAGCGAAAAAGAAACCAATTTTAGTCATGATCATGGACTCTGATTGCACATCTACTATTGACATCACTTCAATTAGCTATGAATATGAAAAACTTTTAGCTGTTGGACATAATGATTTTGATATTGTGAGGCCACATAGTGAATTAGATCCTATAAGTATAAATTACACTTCTGGCACAACATCTAGGCCTAAAGGAGTTGTTTTCAGTCACAGAAGTGCTTATCTGAACTCTCTCGCAACGGTTCTACTCTTACAAATGAGTCTCTTTCCTGTTTATCTTTGGAATGTTCCATTGTTTCATGCTAATGGTTGGTGCTTAGCTTGGGGAGTGGCAGCACAATTTGGAACTAATGTTTGTCTAAGGAAAGTATCtgcaaaaaacatatttgacaATATAGTTCAACATAATGTAACATATATGGGAGGAGCTCCTACGGTTTTGAACATGATTGCGAATTCTACATTGACCGATAGAAAGAAGCTCAATCACAAGGTAGCAGTATTAACAGGAGGTTCTCCTCCACCGCCGCAGATCCTTTCCATGATGGAAGAAAATGGTTTTAGTATTACTCACATGTATGGCCTCACAGAAACATGTGGTGCAGGGACTTTTTGTGCTTGGAGACCTGAGTGGGACATGTTACCGATCGAAGAAAAATCGAAGATAAAAGCTAGGCAAGGTGTGCCAAATTTAGGGATGGAGGAAATTGATGTCAAAGATCCTTCAACAATGGAAAGTGTTCCGGCTGATGGAAAAACGGTTGGCGAGGTGATGTTTAGAGGGAATACATTGATGAGTGGTTATTTTAAAGACTTGAAAGCAACAGAAGAAGCTTTTAAAGATGGTTGGTTTCATAGTGGCGATCTCGCTGTGAAACACTCCGATGGTTACATAGAAATCAAGGACCGATTGAAGGACATAATTGTATCCGGTGGAGAAAACATAAGCTCGATTGAGGTAGAAACAGTTTTGTATAGTCATCCAGCAGTTCTCGAGGCTGCAGTCGTTGCTAGACCTGATGATCTATGGGGCCAAACTCCTTGTGcatatttgaaattgaaagacGGATTTGATGCAGATGTTGAAGAAATAATAAACTTTTGTAGGGATCGTTTGCCACATTTCATGGCTCCTAAAACAGTCATTTTTCTAGATATGCCGAAAACATCAACAGGTAAGATACAAAAGTttgttttgagagagaaagCCAAGGCCTTGGGAAGCATTTCAAATGTACCATCTGTTGGTAGCATTTCAAATGTACTATCTGTTAGTAATAAGTTGTATGCTTAA 1920 0.3781 MASTLPMSNIVGIPQFLHKYQSQVNLSKYAARQQRLKTKKITCINSEPHLHRLSQNGRTIPQEIKNIGSGTWESMEGLLHCSANSVPLSPINFLERAAKVCRDRTSVVYGSLNYNWGQTHQRCLKLASSLAQLGVSRGDVVATLAPNIPSMYELHFAVPMAGAILCTLNSRLDANMVSVLLEHSQAKVFFVDYQLLDIARGALDLLTERAKKKPILVMIMDSDCTSTIDITSISYEYEKLLAVGHNDFDIVRPHSELDPISINYTSGTTSRPKGVVFSHRSAYLNSLATVLLLQMSLFPVYLWNVPLFHANGWCLAWGVAAQFGTNVCLRKVSAKNIFDNIVQHNVTYMGGAPTVLNMIANSTLTDRKKLNHKVAVLTGGSPPPPQILSMMEENGFSITHMYGLTETCGAGTFCAWRPEWDMLPIEEKSKIKARQGVPNLGMEEIDVKDPSTMESVPADGKTVGEVMFRGNTLMSGYFKDLKATEEAFKDGWFHSGDLAVKHSDGYIEIKDRLKDIIVSGGENISSIEVETVLYSHPAVLEAAVVARPDDLWGQTPCAYLKLKDGFDADVEEIINFCRDRLPHFMAPKTVIFLDMPKTSTGKIQKFVLREKAKALGSISNVPSVGSISNVLSVSNKLYA 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03587 639 PANTHER ACYL-ACTIVATING ENZYME 62 618 - -
Tsu04g03587 639 Gene3D - 514 616 IPR045851 -
Tsu04g03587 639 Pfam AMP-binding enzyme C-terminal domain 528 602 IPR025110 -
Tsu04g03587 639 CDD ttLC_FACS_AEE21_like 86 610 - -
Tsu04g03587 639 ProSitePatterns Putative AMP-binding domain signature. 262 273 IPR020845 -
Tsu04g03587 639 Gene3D - 78 513 IPR042099 -
Tsu04g03587 639 SUPERFAMILY Acetyl-CoA synthetase-like 79 613 - -
Tsu04g03587 639 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 62 618 - -
Tsu04g03587 639 Pfam AMP-binding enzyme 95 519 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03587 Tsu-Chr4 44951403 44957294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03587 151 620 Miscellaneous Gene Families AT1G20560 62.924 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03587 - - gmx:100500429 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03587 04 44951403 44957294 Tsu04g03587 04 44951403 44957294 ECH