Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03486 ATGAAACACGGTTTGTCACCAGCTTCAGCTTCgttgttgttcttgtttctATGTTTCTCATCATGCGTGTTTGCTTTCATTCCTCATCGTACGCTGCTCCTCGACAACAATAACTTGTTCTTGAATGAAGATGGGAGATACCTCAGCAGTAAGGAGATATGGTTCAATCAAACTCTCGATCACTTCTCCCCCTATGATCACCGTCAATTCCAGCAACGTTACTATGAATTCCTAGACTACTTCAGGATTCCGGATGGACCAGTTTTTCTGGTGATAGGTGGTGAAGGACCAAACAATGGGATAGTAAATGACTATATTGGTGTACTGGCAAAGAAGTTCGGAGCGGCTGTGGTTTCTCTTGAGCATCGCTATTATGGAGCGAGTACCCCATTTGATAATTTAGCGACGgaaaatttgaaatatcttTCATCCAAGCAGGCACTCTTTGATTTGGCTGTTTTTCGCCAGTATTATCAGAATTCTTTAAATGCAAAGCTGAATAGAACAGGAGTTGAAAATCCATGGTTCTTTTTCGGTGGCTCATATTCTGGAGCACTCAGTGCATGGTTCCGTCTTAAGTTTCCCCATTTAACATGCGGAAGTCTTGCAAGTTCTGCAGTTGTTCTTGCTATTCAAGACTACGTCGAATTTGATCAACAGATTGGCGAATCGGCTGGTCCTGAGTGTAAAGCAGCATTACAAGAAACTACTCAACTGATTGAAACAAAACTTGCAGCCAATGGACCGACACTGAGGGCAACTTTTAATGCAGATGATCTTATAGTTGATGGAGACTTCTTATATTATCTGGCTGATGCTGCTGTTATAGCGTTTCAATATGGAAATCCAGATAAATTATGCAAGCCTATGGTTGATGCAAAGAAGGCCGGGGGGGATTTGGTGGAAGCTTATGCCAAATATGTCAAAGAATACTATGCTGGAACCTTTGGCGTAAATACACAAATTTATGACCaggaatatttgaaaaaaaCTGAAATCAATGAAGACAGTTCTTCTCGATTATGGTGGTTTCAAGTTTGCACCGAAGTTGCGTACTTTCAGGTGGCTCCCGCAAATGATAGCATACGTTCCTCAAAAATTGACACAAAATATCATTTGGACCTCTGCAAAAATGTCTTTGGAGATGGTGTCTTTCCTGATGTTGATGCTACTAATTTATACTATGGGGGCACAAACATTGCTGgttcaaaaataatatttacaaatGGCTCACAGGATCCATGGCGTCATGCTTCCAAGCAAACTTCATCCACTGATTGTGAGTTGCCATTTACTTTTTCTGTTAGTTTAGTCAGTAACATTCTTTAG 1329 0.3943 MKHGLSPASASLLFLFLCFSSCVFAFIPHRTLLLDNNNLFLNEDGRYLSSKEIWFNQTLDHFSPYDHRQFQQRYYEFLDYFRIPDGPVFLVIGGEGPNNGIVNDYIGVLAKKFGAAVVSLEHRYYGASTPFDNLATENLKYLSSKQALFDLAVFRQYYQNSLNAKLNRTGVENPWFFFGGSYSGALSAWFRLKFPHLTCGSLASSAVVLAIQDYVEFDQQIGESAGPECKAALQETTQLIETKLAANGPTLRATFNADDLIVDGDFLYYLADAAVIAFQYGNPDKLCKPMVDAKKAGGDLVEAYAKYVKEYYAGTFGVNTQIYDQEYLKKTEINEDSSSRLWWFQVCTEVAYFQVAPANDSIRSSKIDTKYHLDLCKNVFGDGVFPDVDATNLYYGGTNIAGSKIIFTNGSQDPWRHASKQTSSTDCELPFTFSVSLVSNIL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03486 442 PANTHER OS10G0511600 PROTEIN 38 426 - -
Tsu04g03486 442 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 38 426 - -
Tsu04g03486 442 SUPERFAMILY alpha/beta-Hydrolases 114 365 IPR029058 -
Tsu04g03486 442 Gene3D alpha/beta hydrolase 54 425 IPR029058 -
Tsu04g03486 442 Gene3D Serine carboxypeptidase S28, SKS domain 213 366 IPR042269 -
Tsu04g03486 442 SUPERFAMILY alpha/beta-Hydrolases 81 216 IPR029058 -
Tsu04g03486 442 Pfam Serine carboxypeptidase S28 57 429 IPR008758 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03486 Tsu-Chr4 44029572 44036325 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03486 - - aprc:113857786 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03486 04 44029572 44036325 Tsu04g03486 04 44029572 44036325 ECH