Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03482 ATGGCCGCGGTTCGTAGGCATATGCGGCAATTATCTGGATTAAGAGCTTTAGGGCTTTCCAGaatatcaccatcatcttcttcGTTTCAAACTTCAACAATATTCGATCCATATTTTTCACCTTCACTTTCAACCACAAGATCTTTTTCTCAATTGGTCAAATCCAATGGAAAACACTTGTTTCTCGTTGACACATTGGCTCTTGTTAGGAGATTAGAAGCACAAGGAGTACCTTCAAAGCAAGCTGAAGCTATAACTGCTGCTATAACTGAAGTTTTGAATGATAGTCTTGAAAATGTGTCTCAAGCATTGGTATCTAAAGGAGAAATGCAAAAAacTGAAATGATTCAAGAGTCCAACCTGTCCAAGTTCAAATCAGAAGTACAAAGCTCACAGGGGCACCATTTTTCACTGTTGCAACATGAGACTGAGAAGCTTAGGAATGATATAGAGAAGATGCGCAGTGAACTGAGGTATGAAATGGACAAAGTCACTGCTGGACAGCGATTGGATTTGAACCTTGAAAGGGGGAGAACTAGGGAGGAACTGTCAAATCAGAGTGCTGAAACTAACAACCTGACCAACAAACTTGATAGGGAGATTCATTCTTTAAGAGCACAACTGGAAGCCGCTAAATACGAGGTCATAAAATACTGCATAGGAACACTTGTTTCAATCTCTGCTGTTGGTCTTGCTGTTCTTCGTATCTTGATGTGA 717 0.3919 MAAVRRHMRQLSGLRALGLSRISPSSSSFQTSTIFDPYFSPSLSTTRSFSQLVKSNGKHLFLVDTLALVRRLEAQGVPSKQAEAITAAITEVLNDSLENVSQALVSKGEMQKTEMIQESNLSKFKSEVQSSQGHHFSLLQHETEKLRNDIEKMRSELRYEMDKVTAGQRLDLNLERGRTREELSNQSAETNNLTNKLDREIHSLRAQLEAAKYEVIKYCIGTLVSISAVGLAVLRILM 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03482 238 Coils Coil 180 214 - -
Tsu04g03482 238 PANTHER UNCHARACTERIZED 1 238 IPR024461 -
Tsu04g03482 238 Pfam Coiled-coil domain-containing protein 90-like 63 237 IPR024461 -
Tsu04g03482 238 PANTHER FMP32-LIKE PROTEIN 1 238 - -
Tsu04g03482 238 Coils Coil 136 156 - -
Tsu04g03482 238 Gene3D - 64 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03482 Tsu-Chr4 44004151 44009230 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03482 - - mtr:MTR_8g076260 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03482 04 44004151 44009230 Tsu04g03482 04 44004151 44009230 ECH