Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03475 ATGAACAATCCTCCTCCGCCGTGGACTCCTGAAGACGATTTTCTCCTCAAGAACGCCATTGAGGATGGAGCTTCGCTGGAATCGTTAGCCAGAGGAGTTGTTGCTTTCTCCCGGAGGTACTCCCTTGCGGAATTGAGAGAGCGCTGGGGTTCTCTTCTCTATGATTCTGATGTTTCGGGTGAAGCTTCTGCTGCAATGACGAAGTTGGAGATTGCCAAGGCTAACGGTAACGAAATCAAGGAAGCTGTCGCTGCAGACGTTGCTGCCCCGAAGGCGAAGCGGAAACCTCAGAGTATTCGCAGGATGTACTACACCATGCGGAAGAAGATTCGTACAgaggttttttttaatactgTTGATATGGCTTTACATGATGAGATGTGTATTGAAAATAATGTCACTGAAAAAAATAGTGGGGGGGCTAGGTTTGATAATATTAATGATAGTTTAAATAAGAATGTCAATAATAATTCTCATGTCAATAGTTTGTTTAATTATGGGAATCAATTGGGGTTAGTGGGATCTGGGGTGGGGTCCTCTCATTCAATGAGTGAAGATCCACTGTGGAAGTCAATTGAGGATGTCTCTGCACCTAACATGCCGGTTCATGTTAgtcttgaaaatgaaaatggagGTTCTGAGTCAAAAGAGATGATTCCCCATGGTTCCGATGCTCTCATGAACTCTGCGAATGGAGACGAGCTTATGTTTATGAATGTAGATGAGAAGGATGAAACTGCCGCGAATAAGAAGTCTGATGATATTGTCGATCCAATTCCTTTGCGTTCTCCTCGTGGCATTCAAGGCGATGACATGTCTGGTGTTGGTGAGTCTCAGAAGTTGGTTGCCGAAACACAACTTGCTATTGCAAATGGTCCGTCTGCTGAGTTAGAGGATGTTGCCATCTCGACAGGCAGTAGTCAAGGTGATTcggattttgtttttgattgtgGAAATGAAGTCCAATCTTCTGGTGCAGCGCAAAGTTCTCACCCTAAGCCTGCAATTGAATTTAGGTTCTGTTCATTGAACACTGAGGACCCTAATGTCCCGTCTGATGGTGCTGAGGATGTAAACGAATCCACTGCAGTTCCTATTTCAATGAGCGCACCCGTTGTCGTAGTTCCTAGTTCTGTGAACGTATCCTCTGTAGTAGGTCCTAGTTCTGCGAACATAGCCGCTGTAGCAGTTCCTAATTTCATGAATCCAAAACCCATATCAATTGTTAAAGAGGTGGGTTATCCAGATTCCTCTATCAGTAATCAAAGAAGAAATGAACCAGCTAGAAGCTTGAAGAGAAAAGACATTCCTTCAAACTCTTTTGTAGCTTCTCAGTCAGTTCGACCAGGATTAGTGCCTAATATAAAATCAAGGAAGGAAAACCCTGCTGCACCAATAACTGAAAATCCTGCAAAGAACTTGATTTCTGCAGTTTCTAGACAAAGTAATGTCATTGTCAACCCAACTCAAAGCAGATTAGTCCATGCAAATGCAAAGCATGCTTCATATGGACTTCCGGCACAAGAGGTAATTATTGCTCTTCCTTCAGCTGTCGATACGCATCCAAAGGAAGAGGAACATAAGAATTTACCTGATATGGAAGCAAAATTAACATGCGTCGATCAGGAAAGAGGTGACGATGACGATGAAGATAGTGATGAAGATGAGAACGATGATGAGCATGAAATTCCTTACTTTTCTGATGTTGAGGGAATGATTCTTGAAATGGACTTAGGTCCAGCTGATCAAGATACAAATGCAAGTACCGAAGTCATGAGATTTCAATGCGAAGAAACTAAGAGGACCATCATGAGATTGGAGCAATGTGCTCAGTCCTTTGTGCGAAGAAACATTGCATCTCGAGGTGCACTTGCAGTATTATATGGGCGCAATATGaggaaatatatttataaaccCGAGGTGATAATTGGCAGATCAACTGAGGATGCAGCTGTTGATATTGACTTGACTAGAGCAGGGCCATATACTCACAACATCTCTAGAAGACAAGCTTCAATAAGGCTGGATGCAGATGGTTCTTTCATCCTCAAAAATCTTGGCAAGAAATCTATATTCTTGAATGGGAAAGAAATTGCTAAAGGACAGCAGCGGGGTTTGAGTGATGGTAGTTTTATCGAGATTAGGGACCTGTCATTCATCTTTGATTTCAATAAGGAATGTGTGGAGAGGTTTATAGAAGATGAGGACGAGGATGAACACCAAAACATTCCAATGGCAATGGGGGAGCATATGTCAACTGTCAATAGTACGGTAATGCCCTTGAGGAATATAGGGAATGGCCGAGAGACATTGTTTTGGAAGGATCCTTGGCTTGGTGATTGCTCTTTGGCGCGGTCCTTTGGGCGCTTATTTGATTTAGCGGAGAACAAGCTGATTACAGTGCATGACATGTATGAGGCGGGATGGGGTGTTGGGGGTGAAGCGTGGAAGTGGCGGAGGAGGTTATATGCTTGGGAGGAGGACTTGGTTTTGGAGTGTATTGCCCGTCTATCTAACGTTGTTTTGCAGGTTGATGCACGTGATGCGTGGGTGTGGAAGTTACATCATTCACAAAGTTACTCAGTTAAATCGGCATATTTGTTTTTGACGGCTCCGATTGTTACTTATATCGCCGTCCATGACAGATTTCTTTGGCTTAAATCTGTCCCCCTAAAGGTGAATATTTTTGTCTGGCGCCTCTTTCTAAACAGGTTACCTACTAAGTTAAACCTTCATCGACGTGGCGTGTTAGATGAGAAACACCTTTCATGTGCGACTTCTTGTGGCAAATTTGAAGATCTGgatcatttgttttttcaatgtGATGTTTATGGCCGACTTTGGTCTAGGATTTCCAACTGGTTAGGTGTTACAACTGCTTTCCCGGGTTCGGCTACTCTCCACTCTACTCATTTTTGCGGAATTGGTGGTTTTTCTAGAGGCATTAATGATATGTTGATTATTATATGGATAGCAGTGCTATTTGTGATTTGGAAGGACCGGAACTCTCGTATTTTTAAATCTGGTTATGACTCCCTTGAGGCAATGGCAGAGAAGGTTAAGCGCTATTCCTTTTGGTGGTTGAAATCGTATTACGTCCTATTCGATTTCGATTACTCCTTTTGGCGTCTTTATCCTTTGAGTTGTTGTCAAGCCATTCTGTAA 3165 0.419 MNNPPPPWTPEDDFLLKNAIEDGASLESLARGVVAFSRRYSLAELRERWGSLLYDSDVSGEASAAMTKLEIAKANGNEIKEAVAADVAAPKAKRKPQSIRRMYYTMRKKIRTEVFFNTVDMALHDEMCIENNVTEKNSGGARFDNINDSLNKNVNNNSHVNSLFNYGNQLGLVGSGVGSSHSMSEDPLWKSIEDVSAPNMPVHVSLENENGGSESKEMIPHGSDALMNSANGDELMFMNVDEKDETAANKKSDDIVDPIPLRSPRGIQGDDMSGVGESQKLVAETQLAIANGPSAELEDVAISTGSSQGDSDFVFDCGNEVQSSGAAQSSHPKPAIEFRFCSLNTEDPNVPSDGAEDVNESTAVPISMSAPVVVVPSSVNVSSVVGPSSANIAAVAVPNFMNPKPISIVKEVGYPDSSISNQRRNEPARSLKRKDIPSNSFVASQSVRPGLVPNIKSRKENPAAPITENPAKNLISAVSRQSNVIVNPTQSRLVHANAKHASYGLPAQEVIIALPSAVDTHPKEEEHKNLPDMEAKLTCVDQERGDDDDEDSDEDENDDEHEIPYFSDVEGMILEMDLGPADQDTNASTEVMRFQCEETKRTIMRLEQCAQSFVRRNIASRGALAVLYGRNMRKYIYKPEVIIGRSTEDAAVDIDLTRAGPYTHNISRRQASIRLDADGSFILKNLGKKSIFLNGKEIAKGQQRGLSDGSFIEIRDLSFIFDFNKECVERFIEDEDEDEHQNIPMAMGEHMSTVNSTVMPLRNIGNGRETLFWKDPWLGDCSLARSFGRLFDLAENKLITVHDMYEAGWGVGGEAWKWRRRLYAWEEDLVLECIARLSNVVLQVDARDAWVWKLHHSQSYSVKSAYLFLTAPIVTYIAVHDRFLWLKSVPLKVNIFVWRLFLNRLPTKLNLHRRGVLDEKHLSCATSCGKFEDLDHLFFQCDVYGRLWSRISNWLGVTTAFPGSATLHSTHFCGIGGFSRGINDMLIIIWIAVLFVIWKDRNSRIFKSGYDSLEAMAEKVKRYSFWWLKSYYVLFDFDYSFWRLYPLSCCQAIL 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03475 1054 Gene3D - 580 734 - -
Tsu04g03475 1054 PANTHER MICROSPHERULE PROTEIN 1 5 742 IPR037912 GO:0002151|GO:0031011|GO:0071339
Tsu04g03475 1054 MobiDBLite consensus disorder prediction 246 272 - -
Tsu04g03475 1054 Pfam N-terminal region of micro-spherule protein 8 70 IPR025999 -
Tsu04g03475 1054 MobiDBLite consensus disorder prediction 416 437 - -
Tsu04g03475 1054 MobiDBLite consensus disorder prediction 542 564 - -
Tsu04g03475 1054 PANTHER FHA DOMAIN PROTEIN 5 742 - -
Tsu04g03475 1054 SMART FHA_2 640 698 IPR000253 GO:0005515
Tsu04g03475 1054 MobiDBLite consensus disorder prediction 544 563 - -
Tsu04g03475 1054 ProSiteProfiles Forkhead-associated (FHA) domain profile. 641 698 IPR000253 GO:0005515
Tsu04g03475 1054 SUPERFAMILY SMAD/FHA domain 626 723 IPR008984 GO:0005515
Tsu04g03475 1054 CDD FHA 638 725 IPR000253 GO:0005515
Tsu04g03475 1054 Pfam zinc-binding in reverse transcriptase 860 948 IPR026960 -
Tsu04g03475 1054 Pfam FHA domain 641 714 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03475 Tsu-Chr4 43908101 43915623 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03475 - - mtr:MTR_8g076470 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03475 04 43908101 43915623 Tsu04g03475 04 43908101 43915623 ECH