Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03462 ATGTTTATAAGTGATGTGAATCACCAAAGAATCAAAACCAATggaatatatatacacatagcAGAAAAAGGAACAGGACCACTTGTTCTTTTGCTTCATGGTTTCCCAGAAATATGGTATGCTTGGAGACACCAACTCAACTACTTGTCACAACATGGTTATCATGTTGTTGCACCTGATTTAAGAGGATATGGTGACTCTGATTCTCCTCTAAATCCTAATTCCTACACTCTTCATCACATAGTTGGTGACCTTATTGGTCTTCTTGATCATTTTGGTCAACAACAGGCATATGTAGTTGGAACTGATTGGGGAGCAAACATTGGATGGCACCTAAGTCTATTTAGGCCTGATAGAGTGAAGGGATTTGTTGCTCTAGGTGTTCCTTACTTTCCAAGATCTCCAACAGATAAAACTGTTGAAactataagaaaaatatatggagATGGAAGTATGGTTTGCCAATTCCAGGAACCAGGTCGCGCAGAGAGAGCTTTTGCTAGATATGATTTCTTGACAGTAATGAAGAAGTTTTTACTGATTACAAGGACACATTTTATAGCAGCTCCTTCTGGCATGGAGATTATTGATTTTTTGCCAACTTCGGTTTTGCCGTCGTGGATAACTGAGGAAGAACTCATGGTCTTTGCAGACAAATTCCAAGAATCTGGTTTCACAGGCGCATTCAATTACTATCGCGCAATGGACTTAAACTGGGAGCTTCTAGCACCATGGCAAGGATCAAAGATTACAATTCCAACTAAGTTTATTGCTGGAGACAAAGATGTTGGTTTTCAAAATGGTACAAAAGATTTTGTTGAAAGTGATATTTTCAAGAGTCTTGTTCCTAACCTTGAAGTGGTTATACTAGATGGTCACCACTATATACATCAAGAGAAAGCTCAACAAGTTTCAGAGGAAATCCTTTCCTTCATCAGTAAATTATCTTTGGATTAG 957 0.3699 MFISDVNHQRIKTNGIYIHIAEKGTGPLVLLLHGFPEIWYAWRHQLNYLSQHGYHVVAPDLRGYGDSDSPLNPNSYTLHHIVGDLIGLLDHFGQQQAYVVGTDWGANIGWHLSLFRPDRVKGFVALGVPYFPRSPTDKTVETIRKIYGDGSMVCQFQEPGRAERAFARYDFLTVMKKFLLITRTHFIAAPSGMEIIDFLPTSVLPSWITEEELMVFADKFQESGFTGAFNYYRAMDLNWELLAPWQGSKITIPTKFIAGDKDVGFQNGTKDFVESDIFKSLVPNLEVVILDGHHYIHQEKAQQVSEEILSFISKLSLD 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03462 318 SUPERFAMILY alpha/beta-Hydrolases 3 314 IPR029058 -
Tsu04g03462 318 PANTHER EPOXIDE HYDROLASE 2 316 - -
Tsu04g03462 318 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2 2 316 - -
Tsu04g03462 318 Gene3D alpha/beta hydrolase 3 316 IPR029058 -
Tsu04g03462 318 PRINTS Epoxide hydrolase signature 113 126 IPR000639 GO:0003824
Tsu04g03462 318 PRINTS Epoxide hydrolase signature 33 51 IPR000639 GO:0003824
Tsu04g03462 318 PRINTS Epoxide hydrolase signature 53 68 IPR000639 GO:0003824
Tsu04g03462 318 PRINTS Epoxide hydrolase signature 252 268 IPR000639 GO:0003824
Tsu04g03462 318 PRINTS Epoxide hydrolase signature 289 311 IPR000639 GO:0003824
Tsu04g03462 318 PRINTS Epoxide hydrolase signature 99 112 IPR000639 GO:0003824
Tsu04g03462 318 Pfam alpha/beta hydrolase fold 27 130 IPR000073 -
Tsu04g03462 318 PRINTS Alpha/beta hydrolase fold signature 53 68 IPR000073 -
Tsu04g03462 318 PRINTS Alpha/beta hydrolase fold signature 99 112 IPR000073 -
Tsu04g03462 318 PRINTS Alpha/beta hydrolase fold signature 113 126 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03462 Tsu-Chr4 43757598 43759742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03462 4 316 Acyl Lipid Metabolism Gene Families AT3G51000 64.577 1.84e-153 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03462 - - gmx:100818894 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03462 04 43757598 43759742 Tsu04g03462 04 43757598 43759742 ECH