Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03448 ATGGTAATTGAAGCTAAAGTCTCAGAACAAAAATGGCGTTACACATGGGAATCACAATCTCACACACCAACACTCCGTTTACTCCTTTTTccattctctaaaaccctaaacccttCTCTAAATCTCACCGTTCATCTTCATTCACCACCTTCATTCCTCACTCTCACTTCCACCTCCGTCGCTCTCTCCCTTAGGGTTCCGATTCCCAATGTCTTACTCGACGCCGATTTCCCTCCCACCGTCCGATCATTCACCGACCATATCGAAGTCAAACTCCTTCTCTTACTTCCCGTCGATCATCCTGCTCTCTCCGCACTCCATCAATCCTCGCCGTTACCTCAACCTCTGTTAATGGAATATGATGTGGATAAATTGTCTTCAGCTGAAGAAGTTGAATTTGTTTGTAGAAGTTGTGGACACGGTTTGACCAAAAAACCGATCAGGAATTTTGTTGAAAAGCCATCAGCGAATTGGAGGGAAATAGCTGACAATTGGTTTGGGACTTGTTGTTGTTCGTTTGGAGGTATAAGTGAGAAGCTGGTGACAAGGTATGTGAATTCTTACGCGTGTGCGCAGGGGATGTGCCTGTTGAGCTCTACATCTGTCACTTTTTGCAAGGATGATCTTGTGGGAAGTGATTTTCCTGAACCGTGTGGACAGCTGCATGAGTGTAGTTATATAGCAGATGATTTTGGAGGCGTTTCTGTTAGCGAGGGCACTGGAAACTTTGGACTGAATGAGGAAAGAACTTCAACCTGCTATGATGCTGGTGAAGCGAACGGTGCTTTTGATGAAAATGCAAGGGTTTCCCATCCTGAGAATGGACAGCGTTCTGTGAATTTCAATGAAGTTGCTAAGAATGAACCTGATTGCAGTGGCTTCGCTCGTATATGTCTAGATTTGAATGACACTAAAGATGGGACCAACATTCCTAGTTGCTGTACTCCGACAAGCACTCTAGGAGATGAAGATGGTGAACATGCTAGGAAGATTGAAACTGTGGAAATTGTGGGGAATCAGAAGACTTTCCTTAATGGTTTTCTTGAAGATATTTTCATGGCTAGATCATCAAATCTTTCAAAGGATATTTATTGGCATGAATTTATATGCCCGCAATGCACAACTCTCCTTGGAGCCTACCCATGTTGTGAGGGTTGTGCGCCTGTAGACGGAGGTGTACGATTGTTCAAATGTTATATTTCAACCTGTGTGCCAGTTTTAGGATCAGGGGACATTTTCAGCAAGTACACAGTGGACAAAATGTTTGCAAATCAGTTGATGGAGTGTGCAAATGATGAGTCAACATTTCGGTTTGTCGTTAGAGATCTGACAACCAAATCTCCTGTCCTGCAAATCATTCTTTTAAATCCAGATACTTGGTCCTGTTCTGGTAATTGTTCTAGTACAGAGGACAAAGACCCAGATCCTAAATTACAGTTACGGCCGGTCATAAAGGTCCTTTTTTCTGACTCCAAACCTGCAACAGAATCTCAATTAAGGATGATAGAGGAATGGGCAGCAAAGAATTCAGCTGAAGACATTTTCATGCTAACTTATCAAATACAAGACCTGGTGGATGCATTGATGTCAGCAAAAGATATGTATCCACCTTCATGTGCTTCTCTTCATGGTTTAATTTTGTCATCTTTGCAACGTTTTGTTCGTCGCTTTCCTGTTTCCTCTCTACTCTTCTTCTTCCTGCTACTGTCCACTCCTAGATGCACAATTTCTCAACCTAACCTTGTTCCCAAAATGTTTCACTCCACAACGTTAACCATTTTACTCCTAGGTTTTCTCTTGCAGATATCATGGGTCGCTTCAATTTCGATGCCGAGTTCCAATTGTTACGCTTTCAATAATTCAAGTCGAATTGTTGATTTTAGTAGCTGGTTTGGTTACCCTTTTGAGTATGATGATGAGAAGGAAGGTTCTGATTTGGTGGTTCGATTCTGCAAAGACGTTGAGAGTAGATCACAATCGGGATATGTTGATTTTGGTCGATTTGACAAGCTCAACTACTTTGTTGCTGGTTCTGGCCAATCTGATTTTGTACAAGAGTTTTATAATGGTGACCTAATGGGTTGTGAACAAAGTTATGACAAAATGGGACGGACAGCTCAGGTAAATATCATATGTGGGAGTTGTCCTAATGGACAATGTAAAGGTCGTCCTGGATGCATATGTCATGTTGCATATGAATCGAAGTGCAGGTCTTTTATACTTTGCTCTACTCTCAGCCATCCTTTTCAAAACGAAAATGCATACATCTGA 2271 0.4152 MVIEAKVSEQKWRYTWESQSHTPTLRLLLFPFSKTLNPSLNLTVHLHSPPSFLTLTSTSVALSLRVPIPNVLLDADFPPTVRSFTDHIEVKLLLLLPVDHPALSALHQSSPLPQPLLMEYDVDKLSSAEEVEFVCRSCGHGLTKKPIRNFVEKPSANWREIADNWFGTCCCSFGGISEKLVTRYVNSYACAQGMCLLSSTSVTFCKDDLVGSDFPEPCGQLHECSYIADDFGGVSVSEGTGNFGLNEERTSTCYDAGEANGAFDENARVSHPENGQRSVNFNEVAKNEPDCSGFARICLDLNDTKDGTNIPSCCTPTSTLGDEDGEHARKIETVEIVGNQKTFLNGFLEDIFMARSSNLSKDIYWHEFICPQCTTLLGAYPCCEGCAPVDGGVRLFKCYISTCVPVLGSGDIFSKYTVDKMFANQLMECANDESTFRFVVRDLTTKSPVLQIILLNPDTWSCSGNCSSTEDKDPDPKLQLRPVIKVLFSDSKPATESQLRMIEEWAAKNSAEDIFMLTYQIQDLVDALMSAKDMYPPSCASLHGLILSSLQRFVRRFPVSSLLFFFLLLSTPRCTISQPNLVPKMFHSTTLTILLLGFLLQISWVASISMPSSNCYAFNNSSRIVDFSSWFGYPFEYDDEKEGSDLVVRFCKDVESRSQSGYVDFGRFDKLNYFVAGSGQSDFVQEFYNGDLMGCEQSYDKMGRTAQVNIICGSCPNGQCKGRPGCICHVAYESKCRSFILCSTLSHPFQNENAYI 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03448 756 PANTHER E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER 13 551 IPR019193 -
Tsu04g03448 756 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 83 539 IPR019193 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03448 - - cam:101505599 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03448 04 43681455 43689538 Tsu04g03448 04 43681455 43689538 ECH