Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03431 atggaagTACCACAAGTACTACACATGAATGGAGGTGTTGGAGAAGCAAGCTATGCAACCAACTCCTTGGTACagGAACAAATGATTTCTTTGACAAAGGCTCTTAGAGAAGAAGCCGCAATTAGTCTCTATTGCAATTCATACCCAGGAAGCCTGGCAATTGCAGATTTAGGTTGCTCATCTGGACCAAACACTTTATTGGTGGTATCGGAATTTATCAAAGTTGTAGAAAAGCTTTGCCGAGAATTGAATTATAAATCTCCCGAATACAAGGTCTTTTTGAATGATTTACCGGGTAATGACTTCAACACCATTTTTAGGTCTCTCGatagattcaaagagagtttgTGCGGTGAAACAGAAACTAAAATGGGTCCGTGTTATATCTTTGGAGTTCCTGGTTCTTTCTATGGGAGAATTTTTCCTAATCGAAGTTTGCATTTCGTTCATTCATCTTACAGCCTTCAGTGGCTATCGAAgGTTCCTGAAAATGTAAACAACAATAAGGGCAACATTTACATGGCTCGTACAAGTCCTCCAAATGTACTTACTGCTTACTACAACCAATTTCAAAGAGacttttctctttttctcaAGTGTCGTGCTGAGGAACTTATTGAAGGTGGTCGCATGATGCTAACATTTTTAGGAAGAGAAAGTGACATTATGTATAGCAAGGAATGTTGTTACATTTGGGAGCTTATGGCTATGGCTCTTAATGATATGGTCTTGGAGGGCATCATAAAAGAAGAACAAGTTGATACATTCAACATCCCTCAATATACACCATCTCCATCCGAAGTGAAATTAGAAGTTCTTAAAGAAGGATTATTTGCCATTGATCAATTGGGTGTTTCTGAAGTGAATTGGAATGCTCTTGAAAATTGGAATGCTTTTAAATGTGAGTCTCAAATGTCTGAATCACATAGTGATGGTCCATACAATGTTACACAATGCATGAGAGCCGTTTCTGAACCTTTGCTGATTAATCACTTTGGTGAGTCTATTATTGAAGAGTTTTTCAACTGa 1029 0.3644 MEVPQVLHMNGGVGEASYATNSLVQEQMISLTKALREEAAISLYCNSYPGSLAIADLGCSSGPNTLLVVSEFIKVVEKLCRELNYKSPEYKVFLNDLPGNDFNTIFRSLDRFKESLCGETETKMGPCYIFGVPGSFYGRIFPNRSLHFVHSSYSLQWLSKVPENVNNNKGNIYMARTSPPNVLTAYYNQFQRDFSLFLKCRAEELIEGGRMMLTFLGRESDIMYSKECCYIWELMAMALNDMVLEGIIKEEQVDTFNIPQYTPSPSEVKLEVLKEGLFAIDQLGVSEVNWNALENWNAFKCESQMSESHSDGPYNVTQCMRAVSEPLLINHFGESIIEEFFN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03431 342 Pfam SAM dependent carboxyl methyltransferase 42 342 IPR005299 GO:0008168
Tsu04g03431 342 Gene3D Vaccinia Virus protein VP39 21 289 IPR029063 -
Tsu04g03431 342 PANTHER SAM DEPENDENT CARBOXYL METHYLTRANSFERASE-RELATED 1 341 - -
Tsu04g03431 342 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 342 IPR029063 -
Tsu04g03431 342 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 1 341 IPR005299 GO:0008168
Tsu04g03431 342 Gene3D - 6 342 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03431 Tsu-Chr4 43525813 43528093 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03431 K21483 - gmx:100170650 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03431 04 43525813 43528093 Tsu04g03431 04 43525813 43528093 ECH