Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03421 ATGGAAACTGTAACGCATTCTCGCCACACACATAACAAAGTCTCTATTCCTCTTCCCAAGAAAATCACCACCAACGGTACTTTCTCATCTTCCAAAACTCTCTACGACGACGTTTACGGTGGTCCACCGAAGTTCACCGCTTCCTCCATCTCGCCTCGTTTTGAAGACTACGGTGAGATTTTCTCTAGCTTCCATGCCGGACGGTCATCTTCCATTCCGGTTTTGGATCTTCCGGCGGTTGACTCTGGCGAGGTTTTCTTTGACTTCCGTCGCTCTGCTTTTGACTATGCTGAGGTCTTCGGAGGCTCCGGTGGACTGGATTTTTGGTCTTCTCATGAGGACTTGTTTCGTGAAGGTGattatgatgaagaagaaagagaagaagaagaagactgGACTCCGGTAGAAACCAATTCATTCTCCGGTGACTTGGACCATTTTGGAAATAATGTAGGCGTATCAAATGGAGGTCTCTTCCAGTCTGTTGATGGAAATACGGAGTTCAACATTTCATATCATAAGGTCAATGGTACACACAATGAAGATGCGTCAAAGGGGAAAGCTAGCGTAACTCAGCTGCACGCTGTTCCTGGTGTCACTCGTGTAGTTGATGAAACCATGCTCTTTCATAGGACTGATCCAGCTTTGCAGGTTGTGGACGATATTGACCTTGACATGGAATTTACTGCAGGCAAGGAAAAGAGAAACCGTCATAAGAAAATGACGTCGCGTCCATGTAATGTTACTTCTGGCGAACAGATGCGCAGTTGTGATCTTGATCTGCATGATGGATACAACAAAAATGATTCTCGTTCCAGTGAGATGTTCGTAACTGTGACTGACGTCAGCCTCAGAACTATACCGTCTCAATTGCCACCCCCTTGTCGGCCACCGCCTTTATTAGATCCAAGCAAGGGGTACAATAGTGAATCTCATTCAAACAATGAGCGGATTGATTCTGAAGATACTCTAGGTGATGGTTCGCCACCTTTCTTTGATGTGGAGGTTGATATTATTTCATCTGCTTCTGTTGTAAAAGAAGCCAGAGACAGACCGGAAGCAAACATTAGGAATACAAAAGATTTGAAGGGGAGAAAGAAGAGGGGTTCTGAAAGCAACTTAAAATCGAGTtatgatgtaaaaacaaatgaaGCAATGCTGAGTGAAAATATAGCTACATTTAATAGGTTGAATGATGAGGTAGTGCTGGCAACCTGTGATCGAAGATCTGGCAAAATGAAACTTTCTGCCACAGATGAAAGGCAGAAAGCTAGGAAGGCTGCTCCAGTAATTCTAGAACCATTAGAAGGGGAGAGGCATTTAAACATGTTTGAGGAAAAACACATGAGGGAATCCAGGTCATCTCAAGAATCAGAGCAAAGTATTGGAATTGGGACATGGAAAGAAGCAACTGAATTTTTTGAATTGGTGGGAACAGAAGACTCTCAAAAGGTAATTCATCCCATAAATCACACCAAGAGTTTGGTGCATGATGCCAGAACATTTGAACAATGGAGGAAAGAAGGAGAAGCATCCAACATCCAAGAAGAATACACAAAAGTAAAAGCAGGTTTAGAAAGTCGCCAGCCTGAAGAATACAAGAAGAAATCTAAAGCAGCAAGAGGGGCTTATGAACAGGGCAAAAACATTAGGAGATCTAAATCATCTAATTTGGAATTCGGGCAGAGCGAGCCTACGAGGAATGACgaatttactgatttttttgAGCTTGAAAAGAGTGAGAAGAAGATAAGAACAGCTCACCAACATAGAAAAACTGAAAAGAAAGCAACTGAAGCCAATTCAGTGGAAAGTCAGATATCAAAAGAGGTTGATGAACAAGAACTAAGTGAAGTTCAGTTTAGCTTGATGCttaaagaaaatgagaagaaactAAAACAGAGTGGAGAGCAGAAGCTGGGTTTGAGAAAGCACAAGCAGTCTCaaataatgaaagaaaatgaaaaaaatcaaagagaaGCTTTTGCGTCTGAAGCAGCAAAGAGTGAGGAAACAGTCAAATATTTTGAGGAGCTTGAGAAAATTAATGGAAGATTGAATGAAGCTATTAAGCTGGAGAAGCCAGAAGAAAATGTATCTTGCAAAAGAGAAAGTGAAATTATCTCGAAACAACAGATACAGAACAGAAGTGGACTCAACGAGTCACGTGAAAgtgaagaaaatgagaaaaaccaaaaggattcttttaaaaacaaagaaagtgGTGAAGACCAAAAACACGCTCATGGGCTGCTAGAGAACGAAAAGAGGCTTAGAGAAGACTTTGAAGCAAGTTGGAACAAGACAAAAATTAAAGAGGCATTTGAGCGGGAGGCTAATGAGGCATGTGTAGAAGAtcaaagtaaagaaaaatttaGAGTGGTTTCTAATGAGTATGGAAAAGGAAATAAGCTTGAAGAAACAAGTGACAGCAAAGGGACTTTGAAAGTTCGAAAACAAGCTTTAGATTTAGAAAGACGTAGTGGAAGTGAGGCTCAGATGAAACAAGAAACCGAGagtttttcaaaacaaacaTCTGACACGGAAGGAACTTTAGGTATACAAAATGAGAATAGTCACTCCAGGCAATCTGAGAAGATACTCAAAGATGCTAGTAGGAGTGAAAAGGATGCGGGGTTCGATATTATCTTGGAGCCAATGGAAGTGAATAGAGAAGGTATCAACATGAAGTTTGCTAAAGAAACCAATGAGACACAGAAAACACTGTGCGGTGAAAATCTTCTGGCTCATTCATCCACCATTCATCAAGTAAATAATGGAAAACCAGCGGTATCTCTAGATCCTGTTGCTGATCATGAAATTGAAGAAGCTAGAACTGACTGCAAAATTGGTGGAAGGAAATTGGAAGAGGGTTGTAGAACACAATCAGGAAAGGTGGATTGTAGCGTGAGAAACACCGATGAACTTTGTTTTAGTAAGGAACATGCATGCAGTGAGAAAGATAAGACAGTCCCTCAAATGGAATTTGATTCTAGAAGTCAAGAGAGGAAAATTGCACATGAATGGGGTGAGAGTAGAACGGTCAAACATGATGCGAATGTTGCACTAAACCAGGAAGGTAGCAGGAACCTGAAGTCGTCAAGCCAAGTAAATGCATGTGATGATTACAGAAGGAACACAGCAGTAGATGAAGTTGCTGTAGTTCAAGAAGCAGTAAATGTCCACAACACTTCTCAATGGTCTCGTGTAGCCCATTCCACCAAAAGCAAAGAAAAGTGTCTTAATGAAACTGCCGCCTCGGTAGAGAAAGATGCCGAAAAGCTGAGAATAGAAAAAGAGTTGGAAAAAGAACGTCTaagaaagatagaagaagagttagagagagaaacgGAGAGACAGAAAGATAGAATGGCTGTTGACAGAGCAATGTTGGAGGCTGAGAGGGAaagggaaagagaaaaagaCAGGACAGCTGTTGATAGAGCAACTTTCGAGGCTCGTGATAGAGCATATGCTGAAGCTCGCGAAAGAGCGGAAAGGGCTGCGTTTGATAGAGCAACAGCTGAAGCTAGACAAAGAGCACTGACTGAGGCCAGGGAAAGACTTGAAAAGGCTTGTGCTGAAGCTAGAGACAAATCATACGCTGATAAGGCAACTGCAGAAGCCAGATTGAAGGCAGAACGTGCTGCTGTAGAAAGGGCAACTGCAGAGGCTCGAGAGCGTGCAATGGAAAAAGTGAAGGTTGAGAGAGCTGCATTTGGGTCCAGAGAACAATTAGAGAGATCTGTATCTGATAAATTTGGCGTTTCTTCCAGAAATAATGGAAGACATGGCCCATCCTCAGATATGATGGATTCACAGTTTCACAACTTCAGCTCTGGCACTGGTTCCAGATATCCATATTCAGTTATTGGTGcttcttctttttctgAGAGATCAGAAGAAGGTGAATCAGCTCAGAGATGTAGAGCTAGAATGGAGAGATGTCGCCGAACAGCCGACCGTGCAGCTAAAGCTTTAGAAGAAAAGAACATGCGTGACCTTGTAGCTCAGAAGGAGCAAGCTGAGAGAAGTAGATTAGCGGAGACTCTGGATACTGAAGTGAGGAGGTGGTCAAGTGGAAAAGAAGGAAACTTGCGTGCATTGCTTTCAACCTTGCAATATATCCTTGGGCCTGATAGTGGGTGGCAGCCAATCCCACTCACGGATGTAATTACTTCTGCTGCTGCAAAGAAAGCGTACAGGAAGGCCACCCTTTGCGTCCATCCTGACAAATTACAGCAACGTGGAGCAAGTATTCAACACAAATACATATGTGAAAAAGTTTTTGATCTCTTAAAGGATGCTTGGAGTAAATTCAACTCGGAAGAAAGATAA 4338 0.4025 METVTHSRHTHNKVSIPLPKKITTNGTFSSSKTLYDDVYGGPPKFTASSISPRFEDYGEIFSSFHAGRSSSIPVLDLPAVDSGEVFFDFRRSAFDYAEVFGGSGGLDFWSSHEDLFREGDYDEEEREEEEDWTPVETNSFSGDLDHFGNNVGVSNGGLFQSVDGNTEFNISYHKVNGTHNEDASKGKASVTQLHAVPGVTRVVDETMLFHRTDPALQVVDDIDLDMEFTAGKEKRNRHKKMTSRPCNVTSGEQMRSCDLDLHDGYNKNDSRSSEMFVTVTDVSLRTIPSQLPPPCRPPPLLDPSKGYNSESHSNNERIDSEDTLGDGSPPFFDVEVDIISSASVVKEARDRPEANIRNTKDLKGRKKRGSESNLKSSYDVKTNEAMLSENIATFNRLNDEVVLATCDRRSGKMKLSATDERQKARKAAPVILEPLEGERHLNMFEEKHMRESRSSQESEQSIGIGTWKEATEFFELVGTEDSQKVIHPINHTKSLVHDARTFEQWRKEGEASNIQEEYTKVKAGLESRQPEEYKKKSKAARGAYEQGKNIRRSKSSNLEFGQSEPTRNDEFTDFFELEKSEKKIRTAHQHRKTEKKATEANSVESQISKEVDEQELSEVQFSLMLKENEKKLKQSGEQKLGLRKHKQSQIMKENEKNQREAFASEAAKSEETVKYFEELEKINGRLNEAIKLEKPEENVSCKRESEIISKQQIQNRSGLNESRESEENEKNQKDSFKNKESGEDQKHAHGLLENEKRLREDFEASWNKTKIKEAFEREANEACVEDQSKEKFRVVSNEYGKGNKLEETSDSKGTLKVRKQALDLERRSGSEAQMKQETESFSKQTSDTEGTLGIQNENSHSRQSEKILKDASRSEKDAGFDIILEPMEVNREGINMKFAKETNETQKTLCGENLLAHSSTIHQVNNGKPAVSLDPVADHEIEEARTDCKIGGRKLEEGCRTQSGKVDCSVRNTDELCFSKEHACSEKDKTVPQMEFDSRSQERKIAHEWGESRTVKHDANVALNQEGSRNLKSSSQVNACDDYRRNTAVDEVAVVQEAVNVHNTSQWSRVAHSTKSKEKCLNETAASVEKDAEKLRIEKELEKERLRKIEEELERETERQKDRMAVDRAMLEAEREREREKDRTAVDRATFEARDRAYAEARERAERAAFDRATAEARQRALTEARERLEKACAEARDKSYADKATAEARLKAERAAVERATAEARERAMEKVKVERAAFGSREQLERSVSDKFGVSSRNNGRHGPSSDMMDSQFHNFSSGTGSRYPYSVIGASSFSERSEEGESAQRCRARMERCRRTADRAAKALEEKNMRDLVAQKEQAERSRLAETLDTEVRRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTDVITSAAAKKAYRKATLCVHPDKLQQRGASIQHKYICEKVFDLLKDAWSKFNSEER 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 834 861 - -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 803 833 - -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 346 374 - -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 705 719 - -
Tsu04g03421 1445 Coils Coil 652 672 - -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 1113 1146 - -
Tsu04g03421 1445 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 695 1440 - -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 686 759 - -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 529 570 - -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 1251 1271 - -
Tsu04g03421 1445 Coils Coil 1204 1228 - -
Tsu04g03421 1445 Coils Coil 1172 1199 - -
Tsu04g03421 1445 Coils Coil 719 739 - -
Tsu04g03421 1445 Gene3D DnaJ domain 1319 1445 IPR036869 -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 630 668 - -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 720 759 - -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 686 704 - -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 797 875 - -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 286 329 - -
Tsu04g03421 1445 SUPERFAMILY Chaperone J-domain 1288 1444 IPR036869 -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 549 568 - -
Tsu04g03421 1445 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 26 671 - -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 346 377 - -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 585 611 - -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 529 548 - -
Tsu04g03421 1445 Coils Coil 1078 1143 - -
Tsu04g03421 1445 Coils Coil 1313 1345 - -
Tsu04g03421 1445 PANTHER AUXILIN, ISOFORM A 695 1440 - -
Tsu04g03421 1445 MobiDBLite consensus disorder prediction 1249 1271 - -
Tsu04g03421 1445 PANTHER AUXILIN, ISOFORM A 26 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03421 Tsu-Chr4 43428283 43434807 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03421 - - cam:101494728 1969.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03421 04 43428283 43434807 Tsu04g03421 04 43428283 43434807 ECH