Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03416 ATGAGTTTAGAAATGGCGGCGGAATCATCGGAgggtgaagaagaaggaaagttAAGCGGAGGTAACCAAATTTTGATCGTCGATGAAGAACTCCGTGAATTAGGCAAAAAAGCCGCCTGGAGTGTTAGCTCCTGCAAAACCGGCAACGGCGTTTCTTCTCTTCGTGATGACAATCTCGAAACCTATTGGCAATCTGATGGTGCTCAACCTCATTTTGTTAACATTCAATTCCAAAAGAAAGTTCGATTacaaTTAGTTGTGTTATATGTAGATTTCAAGCTTGATGAGAGTTATACTCCGAGTAAGATTTCCATTCGCGCCGGAGATGGCTTTCATAATCTCAAGGAGATAAAAGCTGTGGAACTTGTGAAACCAACTGGTTGGCTTTATCTCTCGCTATCGGGAGTTGATCCTCGTGAAACTTTTGTCAACGCATTTATGTTGCAAATTGCTGTGTTGTCAAACCATCTCAACGGAAGGGATACTCATGTGCGGCAGATCAAAGTTTATGGGCCTAGACCGAACCCTATTCCACAGCAGCCATTTCAATTTACTTCAAGAGAGTTCATCACCTACTCTACTTTAAGATGA 591 0.4061 MSLEMAAESSEGEEEGKLSGGNQILIVDEELRELGKKAAWSVSSCKTGNGVSSLRDDNLETYWQSDGAQPHFVNIQFQKKVRLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKAVELVKPTGWLYLSLSGVDPRETFVNAFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPIPQQPFQFTSREFITYSTLR 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03416 196 Pfam Anaphase-promoting complex, subunit 10 (APC10) 28 193 IPR004939 -
Tsu04g03416 196 CDD APC10 32 171 IPR016901 GO:0005680|GO:0031145
Tsu04g03416 196 SUPERFAMILY Galactose-binding domain-like 26 172 IPR008979 -
Tsu04g03416 196 SMART APC10_2 31 195 IPR004939 -
Tsu04g03416 196 PIRSF APC10 6 196 IPR016901 GO:0005680|GO:0031145
Tsu04g03416 196 PANTHER ANAPHASE-PROMOTING COMPLEX 10 11 196 IPR016901 GO:0005680|GO:0031145
Tsu04g03416 196 Gene3D - 2 173 - -
Tsu04g03416 196 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 10 11 196 - -
Tsu04g03416 196 ProSiteProfiles DOC domain profile. 10 196 IPR004939 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03416 K03357 - gmx:100526925 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03416 04 43385297 43387748 Tsu04g03416 04 43385297 43387748 ECH