Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03380 ATGGCTTTAGTAGCTAAAAAGAAGACAGCATCAAGAGCAGCAACGGCAATTATATGGCTAATCTCGTGGAGTATTATTATGATCTATCATGTCAGTTTAGCAGAAAGTGTTTTGGAAGACGAAAAATCAGAAAATCTTGTTATGAAAGAAAGACATTTCTTCTGGTATAGTGGAAAGTCTTCCTATGAACGTGTTTGGCCTGAAATGAAGTTTGGCTGGAGAATTGTAGTAGGGTCTATTGTTGGATTTTTTGGAGCAGCATTGGGAAGTGTAGGAGGGGTAGGAGGTGGAGGAATTTTTGTTCCTATGCTCACTTTGATCATTGGTTTTGATCCAAAGTCTTCTACAGCCCTCTCCAAGTGTATGATTACAGGAGCAGCAGGGTCAACAGTGTATTACAATCTAAGGCTTAGACACCCAACATTAGACATGCCACTTATAGATTATGATCTTGCTTTGCTCTTCCAACCTATGCTAATGCTAGGAATAAGCATTGGTGTTGCTTTTAATGTCATGTTTGCTGATTGGATGGTCACCATTTTGCTTATCATTCTATTCATTGGTACATCCACCAAAGCTTTAGTCAAAGGGATTGATACatggaaaaaagaaacaattatgAAAAAGAAGCGTTCGTGCTTCACAGTTAATTCCAATGGTttaaaaatcattctttatagCAAGTTCATTGAAGCTTTATCAAATTTAAACAATATGTTAAATTCTTGTGTGCAGGTTCCTTTACTAGACAACATTTACTGGAAAGAATTATCAGTTCTTCTGTATGTTTGGGTGGCTTTTCTCATTGTTCAAATTATTAAGACATACAGCAAAACTTGTTCCATAGAGTATTGGATTCTTAATTCCTTGCAGGTGCCTATTGCAACTTCTGTTACACTTTTTGAAGCCATATGCTTATGCAAAGGAACTAGAGTAATTGCATCAAGGGGAAAGGAAATTAATTGGAAGTTTCATAAGATATGTCTTTACTGTTTCTGTGGAATAATAGCTGGTATGGTTAGTGGTTTACTTGGTCTAGGAGGTGGCTTCATTTTGGGACCACTATTTTTGGAATTAGGAATTCCTCCTCAGGTAGCTAGTGCTACATCAACTTTTGCTATGGTTTTCTCTTCCTCCATGTCAGTGGTACAATACTACCTTCTAGATCGCTTCCCAGTACCCTATGCTTCGTATTTAGTTTTGGTTGCAACCATAGCTGCATTAACTGGTCAACATGTGGTGAGAAAGATAATTGCTATCTTTGGTAGAGCATCTATCATTGTCTTCATATTAGCCTTCACCATTTTTGTGAGCGCAATCGGTTTAGGTGGGGTGGGAATAGTGAACATGGTTGAGAAGATGGAAAATGAAGATTATATGGGGTTTGACAATATCTGCCACCATGGGAAAAAATATGGGGTTTGA 1425 0.3705 MALVAKKKTASRAATAIIWLISWSIIMIYHVSLAESVLEDEKSENLVMKERHFFWYSGKSSYERVWPEMKFGWRIVVGSIVGFFGAALGSVGGVGGGGIFVPMLTLIIGFDPKSSTALSKCMITGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTILLIILFIGTSTKALVKGIDTWKKETIMKKKRSCFTVNSNGLKIILYSKFIEALSNLNNMLNSCVQVPLLDNIYWKELSVLLYVWVAFLIVQIIKTYSKTCSIEYWILNSLQVPIATSVTLFEAICLCKGTRVIASRGKEINWKFHKICLYCFCGIIAGMVSGLLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYYLLDRFPVPYASYLVLVATIAALTGQHVVRKIIAIFGRASIIVFILAFTIFVSAIGLGGVGIVNMVEKMENEDYMGFDNICHHGKKYGV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03380 474 PANTHER CEREBLON 17 467 - -
Tsu04g03380 474 Pfam Sulfite exporter TauE/SafE 69 189 IPR002781 GO:0016021
Tsu04g03380 474 Pfam Sulfite exporter TauE/SafE 331 437 IPR002781 GO:0016021
Tsu04g03380 474 PANTHER PROTEIN, PUTATIVE-RELATED 17 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03380 Tsu-Chr4 42963562 42967878 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03380 - - gmx:100789748 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03380 04 42963562 42967878 Tsu04g03380 04 42963562 42967878 ECH
Tsu05g00731 05 6153151 6158572 Tsu04g03380 04 42963562 42967878 PCT