Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03377 ATGAGATATAGGATTTCGTATTTGATGGATGAGATCTGGGAGAAGGCTGTTGAAACGGCGTTAGAAGGCGAGAAGGATCACGCTTCCGCTAAAACGCTAACACTTGACGGCGCCGTTAAGTGCGTTCAAGGACGTTTACCTCCTCCGAGCCTTCTAGAAAGGTTCCAGAACCTTCAGCATCTCTCGATTGCAAACGTCGGCGTTTCGTCTCTGGAGCAGTTCCCGAGGCTCCGGAGTTTGCAGAAGTTGAATCTCTCCGATAACCGGATCGCCGGTGGTTTGGAGTTTTTGGTTCAGGCTGGACTCGATTCGCTTCGTGATCTCGATTTATCGAACAATAGGATTCAGTTTATCGAAGATCTTGCGCCGTTGGCGCAGGTGAAGCTTGTTTCATTGGATCTGTATGAGTGTCCTGTTACTCGTGTTAAGGATTATCGATCTAGGGTTTTTGGTTTGATTAAGTCGTTGAAGTATTTGGATAAGATGGATGCGGAGGAGAACGAGAGACCGGAGTCTGATGATGAGGAGGAGGACGATGAggaagaggaggaggaagaagaggaTGATCCTGGGAGTGGTGAGATTGATGGAGGAGAGGAAGATCGACATTTTGGTATGAATAATGGACATGGTGAAGGTATTGATGTTGATGGAGTTGTTGATGCTGATGAGGATGAAGAGAGTGATGCTGATGAGGAGGTGACGGAGACTTCGAGGGGTGGAGTGAATGGTGTGAACCTGAACCATCAGGAGAATGGGTTTCATGTTGCTCCTGTTGATGTTgaagaggaagatgatgatgaagattctGGTGAGGAGATTGATGAGGAAGagggtgatgatgatgatgtggtTGAGGTTCATGAGATtgatgatagtgatgatgatgaggatgggATTGAgtatgatgaggatgatgatgacgatgagGACGATGATGAGGTGGATAATGATGAAGGGGATTTTGCTGAACCTGAGAGTACTTCTGGAAGGTTGGTGAGTACTGAAGGTGAGATTGATGGGCATGAGCAAGGTGAGGAAGATGGAGATGAGGATGACAATGGTGAGACTGGAGAAGATGAGATGGCggttgaagaagatgatgacgatgatgatggAGAGTTTGAAGATGACGATGAAGAAGAAGACTTTGGTGCTGGATATCTTGTTCAGCCAGTTGGACAGGCTGAGGCTCTCAATGATGTGGTTGTCGACACTGATGAGGTTGAAAACGAGGATGGTGAAGAGGAGGAAgaagttgatgatgatgatgatgaagacaATGATGTTCAAGAAGTGTTGCCTCCTCCTGCCTCTTCACACCCCAAGAGAAAGAGggacaatgatgatgatgatgaagatgacgAGGACGATGAAGGATTCACAAAGCCATCGAAGAAGCATCACTAA 1410 0.3993 MRYRISYLMDEIWEKAVETALEGEKDHASAKTLTLDGAVKCVQGRLPPPSLLERFQNLQHLSIANVGVSSLEQFPRLRSLQKLNLSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQFIEDLAPLAQVKLVSLDLYECPVTRVKDYRSRVFGLIKSLKYLDKMDAEENERPESDDEEEDDEEEEEEEEDDPGSGEIDGGEEDRHFGMNNGHGEGIDVDGVVDADEDEESDADEEVTETSRGGVNGVNLNHQENGFHVAPVDVEEEDDDEDSGEEIDEEEGDDDDVVEVHEIDDSDDDEDGIEYDEDDDDDEDDDEVDNDEGDFAEPESTSGRLVSTEGEIDGHEQGEEDGDEDDNGETGEDEMAVEEDDDDDDGEFEDDDEEEDFGAGYLVQPVGQAEALNDVVVDTDEVENEDGEEEEEVDDDDDEDNDVQEVLPPPASSHPKRKRDNDDDDEDDEDDEGFTKPSKKHH 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03377 469 MobiDBLite consensus disorder prediction 341 385 - -
Tsu04g03377 469 Pfam Leucine-rich repeat 64 173 - -
Tsu04g03377 469 SUPERFAMILY L domain-like 48 164 - -
Tsu04g03377 469 MobiDBLite consensus disorder prediction 163 469 - -
Tsu04g03377 469 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Tsu04g03377 469 Gene3D Ribonuclease Inhibitor 11 178 IPR032675 -
Tsu04g03377 469 MobiDBLite consensus disorder prediction 167 195 - -
Tsu04g03377 469 MobiDBLite consensus disorder prediction 218 233 - -
Tsu04g03377 469 MobiDBLite consensus disorder prediction 260 323 - -
Tsu04g03377 469 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 14 463 IPR045081 -
Tsu04g03377 469 MobiDBLite consensus disorder prediction 403 431 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03377 - - mtr:MTR_8g077860 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03377 04 42944684 42947543 Tsu04g03377 04 42944684 42947543 ECH