Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03347 ATGGGAGATATTAGGCTTAATAGGGTAGATCAAGGACAAACCAAGATTAAGAATGTTCCAATAGCTGTTACTCCTGAAGGGTTTTGGTGTTGTCCTTCACCTGTTGTGTTTCAGAAAAGTCATAAGCCTCAAAATCCTTTGAATAAAACTAAACCGTCTTCGTcaccaccacaaccacaaccGAAAAATAGTGTTCAGAAAAAGCCGGTTGCAGTGCAAGTGACTGAGAGAAGAGGTTCTGCATCTGTATCTGCATCGTCTAGGTTGGTTGTTTCTGATGATCAACAATGTAGTATTGGTACGGAAAGGGCTTCAGCTGGAACATCTTTGGCTGGTGAGAGAGTATCTAGACCTAAGATTGAAACCATGCCGAGAAAGGTAGCTATTGAGTTTGGTGAACCGGGAACTTGTGATATGAAAGTGGTTTTATTAGGGAAGCAGGGTTTTTCTGTTAAGTTGAGTGTGCATCGGGATGTTTTGATAGAGAAGAGTAGTTTCTTTTCTGAAAAGATTTCGGAACAATCAGATTTGTCTTCTCTACAAATCGGTGATTGTGAGGATGTTGAGATATATGTTGAAGCTGTTGGTTTGATGTATTGTAAGGAGATGAAACAGCGGCTCATGAAACAGAATGTTTCTCGCATTCTTCGGATTCTTAAGGTTGCAGAATTCCTTGGCTTCAGCTCATGTGTCCAATCATGCTTAGAGTATTTGGAGGCTGTCCCGTGGGttggagatgaagaagaagagaaagtgGTCTCAACTGTACTACAACTCCAAGGGGAAGGAATCGGAATCAACCCTGTATTGAAACGAGTTTCTTCTGATGTTTCCAATGTCCCGAAAGACACACTTTCCCACATAATCGAACTTGTTCTCAAAAGCAATGAGGAAAAAGGTCGCCGAGAGATGAAATCCATAGTTCTAAAGCTCCTCAGAGAGAACAACAGTCTTCCGAGTTACGCACGTTCCACTGACACCTGTAATGACATGATATATAGATCATGCAGAAGCTGCTTAGATTCATTACTATCTCTCTTCAAGCAGGCCGCAGAACCAACCTTTGCAGAGAAACCAAGCAATGAAAGAGATCTCATAGTAAAGCATATAGCTCTAGAAGCCGATAACCTTTCATGGTTGCTCGATATTTTGGTTGACAAACAAGGAGCTGATGAGTTTGCGCTATTATGGGCAAACCAGAAGGAATTAGCCGTCTTACATGAAAAACTGCCGATTGTGTCTCGTTATCACGTTAGCTGCATTTCCGGAAGACTATTTGTCTGCATCGGTAGAGGGGAGTTGTTACCATCAAAGGAAACACGACAATTGTTGTTACAGACATGGTTGCAGCCACTAATGAACGACTACAATTGGTTACAGCATGGATGCAGGTCGTTTGATAGGAAACTTGTGGAGGAAGGAATCGGAAGGACGATTCTCACCTTACCTTTGGAAGATCAACAAAGTATTTTACTTTCTTGGGTTGGAAGTTTCTTGAAAACCGGCGATAGCTGTCCTAATCTCCAAAGAGCTTTTGAGGTATGGTGGCGTAGAACTTTCATTAGGCCGTATGTCGAAAATCAAGATAATGCCGTGTCAGATAGTTCGACGGTGTCAAAGACAGACGAATAA 1632 0.4075 MGDIRLNRVDQGQTKIKNVPIAVTPEGFWCCPSPVVFQKSHKPQNPLNKTKPSSSPPQPQPKNSVQKKPVAVQVTERRGSASVSASSRLVVSDDQQCSIGTERASAGTSLAGERVSRPKIETMPRKVAIEFGEPGTCDMKVVLLGKQGFSVKLSVHRDVLIEKSSFFSEKISEQSDLSSLQIGDCEDVEIYVEAVGLMYCKEMKQRLMKQNVSRILRILKVAEFLGFSSCVQSCLEYLEAVPWVGDEEEEKVVSTVLQLQGEGIGINPVLKRVSSDVSNVPKDTLSHIIELVLKSNEEKGRREMKSIVLKLLRENNSLPSYARSTDTCNDMIYRSCRSCLDSLLSLFKQAAEPTFAEKPSNERDLIVKHIALEADNLSWLLDILVDKQGADEFALLWANQKELAVLHEKLPIVSRYHVSCISGRLFVCIGRGELLPSKETRQLLLQTWLQPLMNDYNWLQHGCRSFDRKLVEEGIGRTILTLPLEDQQSILLSWVGSFLKTGDSCPNLQRAFEVWWRRTFIRPYVENQDNAVSDSSTVSKTDE 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03347 543 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 1 532 IPR038920 -
Tsu04g03347 543 PANTHER BTB/POZ DOMAIN PROTEIN 1 532 - -
Tsu04g03347 543 MobiDBLite consensus disorder prediction 40 69 - -
Tsu04g03347 543 Gene3D Potassium Channel Kv1.1; Chain A 131 258 IPR011333 -
Tsu04g03347 543 SUPERFAMILY POZ domain 136 239 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03347 Tsu-Chr4 42616869 42621188 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03347 - - gmx:100789609 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03347 04 42616869 42621188 Tsu04g03347 04 42616869 42621188 ECH