Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03286 ATGGCGCTGTGGTGGCGCTCCGCCGTAAACCACCTCCGATCAACGGAGGTAAACCATAGCTCATTATCCTCACTCCGTCGTAGTCATTATTACCACACAATCCAAGCAATCCCGAGAGAAAGCACCGGCAGTAAAGTCGCTGCCAGAGATAGAATGCAAGGTCGAATTCCGGCCGTCGTTTTTTTCCAGAACCTTCTCGACAAAAACCCTGAATCACGATCTTTGTCAAAGAAGCATTTGCTCACTGTCGAGAAGAAGCAGATTAAGGCAGTACTCAATTCGATTGAAGCACCGTTCTTTTGTTCCACTCGTTTTCCGATTCAGATTCGTGCTGGTTCTGGATCGACTCATTTGCTTGAAAGTGGAACTGTTCTACCTATCaagATTCACAGGGATGAAGAGAGTggaaatattttgaatttggtgTTTGTTTGGGCTGAAGATGGTATGGATTTGAAGGTTGATGTGCCTGTTGTTTTCAAAGGGGAAGATGCTTGTCCTGGTCTAAAGAAagGTGGATTTTTGAATAAGATCAGAACTAGTCTTAAATATCTTGGTCCTTCTGAGCACATTCCTTCAAAAATTGAGGTGGATATCAGCAACTTAGATATTGAAGATAGGATATTCATGCGTGATATTGAGGTTCCTCCATCCTTGAAGCTTCTGAATAAGAATGAAAACATGCCCATATGTAAAATAGTTCCAACAAGGTTGGGAAATGAAGAACCAGTTGCTGCGTGA 741 0.417 MALWWRSAVNHLRSTEVNHSSLSSLRRSHYYHTIQAIPRESTGSKVAARDRMQGRIPAVVFFQNLLDKNPESRSLSKKHLLTVEKKQIKAVLNSIEAPFFCSTRFPIQIRAGSGSTHLLESGTVLPIKIHRDEESGNILNLVFVWAEDGMDLKVDVPVVFKGEDACPGLKKGGFLNKIRTSLKYLGPSEHIPSKIEVDISNLDIEDRIFMRDIEVPPSLKLLNKNENMPICKIVPTRLGNEEPVAA 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03286 246 Gene3D Ribosomal protein L25, beta domain 150 228 IPR037121 -
Tsu04g03286 246 SUPERFAMILY Ribosomal protein L25-like 38 236 IPR011035 GO:0006412
Tsu04g03286 246 CDD Ribosomal_L25_TL5_CTC 33 92 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Tsu04g03286 246 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 1 244 - -
Tsu04g03286 246 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 1 244 - -
Tsu04g03286 246 Pfam Ribosomal protein TL5, C-terminal domain 152 237 IPR020057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03286 Tsu-Chr4 41959184 41962579 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03286 K02897 - gmx:100802599 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03286 04 41959184 41962579 Tsu04g03286 04 41959184 41962579 ECH