Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03206 ATGCCTTCTCCTTCCACCATCTTTACACTCCATCTTTTCCTCATCATTTtcgcactcttctctctctatgtTCAACCAAAACGCGTCATTTCCGAAGACGGTTACACCATCACCACCGTACTCGACGGTCACAAGCTTCACATAAACCCTTTTTCAGTTCTTCAACGACCCACTTTCTCCGATCTCATCATCCTTGATTCTACAAACAGCACTTTCTACACCGTTCAATTACCCATTTCCCAAGAAAGTGTTTTTAAGAGGTTTTCTGGAAATGGGTCACCTGGATATGAAGATGGTGACGTGGGTTCTGCTACGTTTGATAAACCTAGAAGCTTTGCAGTTGATACAAGAGGGAATGTTTATGTTGCTGATAGGGTTAACAAGGTGATAAGGAAAATTGGCGTCAACGGTGTAACTACAATTGCTGGAGGGTCTTCAGAAAAGTCAAACATCAAGGATGGGCCAGCACAAAATGCATCATTTTCAAATGATTTTGAGCTAAATTTCGTTCCTGTCTTGTGTGCTTTACTGGTGTCAGATCATATGCACCAGTTGGTCCGTCAGATTAATTTGAAGGAGGAAGATTGTACCCTTGGTTCTAAATCTGGGCTTGGTGCAGTTATGACTTGGACTCTAGGGTTTGGACTATCGTGTATACTCGGCTTAATTATCGGCATTGTGGTCCGCCCTTATATCATCCCTCATGAACACACCAGCCGTTACCATTTCATCGCGACATGGAAGCATTGCCAAACCAGTTTGGGGAAGATAGTACCGACACTCTTCTCCGGCATAAAAAGCGCAGTTGCTAGCTGCAGTTGCTCATCCATTTTCGCACTTGCATTGCGACTTTGGAAATTGAGTCTTTCTCTTCTTGTTCTCATGTTTAATATCCACTTTGTTTCTCCAAGGCGGCCTCATCTGGAGTCTGTGTCTTTGCTAGATTTAGATGCCTACAATAGTGGTGAGATATCAAAGTCAAGCAAGTATTTTGACCAATTGAAggatttgatgaattttgacGAAGACCTTATGGATTCAACTAAGGATAAAAGAGGTAGAAAGCCACCTAAAGATGGTAACATTCTTCATCAAGATTCATCTGTGTCTAGTTTAGAAATCGTTTCCAGAAATTGTTCCTCTTCTCGAATCAAACCTAGGGTTTCCAGAAATTGTTCCTCAGGAATGGCGAATACGGAGAAGACGAAGACGAAATCGAAGACGAAATCAAAGACGAAATCAAAGACGAAATCAAAGACGAAATCAAAGGTGAAGACGAAACCTGTGGTGAAGAAGGAAGCGAAGACGAAGAAGAATGAAGAACCGGTTGTTGAGGAAAGGTAA 1344 0.4085 MPSPSTIFTLHLFLIIFALFSLYVQPKRVISEDGYTITTVLDGHKLHINPFSVLQRPTFSDLIILDSTNSTFYTVQLPISQESVFKRFSGNGSPGYEDGDVGSATFDKPRSFAVDTRGNVYVADRVNKVIRKIGVNGVTTIAGGSSEKSNIKDGPAQNASFSNDFELNFVPVLCALLVSDHMHQLVRQINLKEEDCTLGSKSGLGAVMTWTLGFGLSCILGLIIGIVVRPYIIPHEHTSRYHFIATWKHCQTSLGKIVPTLFSGIKSAVASCSCSSIFALALRLWKLSLSLLVLMFNIHFVSPRRPHLESVSLLDLDAYNSGEISKSSKYFDQLKDLMNFDEDLMDSTKDKRGRKPPKDGNILHQDSSVSSLEIVSRNCSSSRIKPRVSRNCSSGMANTEKTKTKSKTKSKTKSKTKSKTKSKVKTKPVVKKEAKTKKNEEPVVEER 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03206 447 MobiDBLite consensus disorder prediction 346 366 - -
Tsu04g03206 447 MobiDBLite consensus disorder prediction 378 447 - -
Tsu04g03206 447 Gene3D - 29 191 IPR011042 -
Tsu04g03206 447 MobiDBLite consensus disorder prediction 427 447 - -
Tsu04g03206 447 PANTHER NHL DOMAIN-CONTAINING PROTEIN 10 394 - -
Tsu04g03206 447 MobiDBLite consensus disorder prediction 378 401 - -
Tsu04g03206 447 PANTHER - 10 394 - -
Tsu04g03206 447 SUPERFAMILY NHL repeat 31 138 - -
Tsu04g03206 447 MobiDBLite consensus disorder prediction 406 426 - -
Tsu04g03206 447 MobiDBLite consensus disorder prediction 346 361 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03206 - - gmx:100816542 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03206 04 40449088 40454226 Tsu04g03206 04 40449088 40454226 ECH