Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03204 ATGGGTAAGCAATTTTTGTTACTAGCTCTCATTCTTCACCTTCACTTTGCAACACTCTCAGCTGCACCTTCCAACAGTTCACCTGCAAAAATTGTTTCTGGGTTTCTCTCTAATGCTGTTCCTGCTTTTACCAAATGGGTTTGGTCCCTTAAAGCTACCACCAAAACTGGGGTTTTGAGTAAGTCAATGATGAAGTTTGAGAGTGGCTACAATGTGGAAACTGTGTTTGATGGAAGTAAGCTTGGAATTGAGCCTTATGCTGTTGAGGTTTTGCATAATGGAGAACTTCTCATTCTAGATTCTGCTAATAGTAACCTTTATAGAATCTCCTCATCACTCTCTTTGTATAGCAGACCGAAATTGGTGGCTGGATCAGCCGAAGGATATTCTGGACATGTTGATGGAAGGCTCAGGGAGGCTAGGATGAACCACCCAAAAGGGATAACCGTTGATGACCGAGGAAATATTTATGTTGCAGATACTACAAATATGGCAATTAGGAAAATTAGTGATTCAGGGGTCACGACAATTGCTGGAGGAAAATGGAGCCGCGGAGGGGGCCATGTTGATGGACCAAGTGAAGAAGCTAAATTTTCTGATGACTTTGATGTGGTTTATGTTGGAAGTAGCTGTTCTCTCCTTGTTGTAGACAGAGGAAACCAAGCCATCAGGGAGATCCCACTCCACTTTGATGATTGTGCATATCGATATGGCAGTGATTTCCCTCTTGGAATTGCAATGCTTGTTGGGGCTGGCTTCTTTGGTTATATGTTGGCATTGCTGCAGCGTAGGCTCGGTGCAATCGTAGAATCTCAGGATGCGCAGGTTTCAGCAACAGTAATGCCTTCTGTTTCTCCAAGTCCATATGAAAAGCCGTTGAAATCCGTAAGGCCTCCTTTAATTCCATCAGCATATGAACCCGAAAAGCAGGAAGAAGGTTTCTTTGGATCTCTCGGGAAGCTTCTTTCCAATACCGGTGTATCAATGGTGGAGATAATGGGAGGATTATTTCCTGTTTTCAGAAGAAGACCACAGAGTTACAAATATCAAAGGCAAACACTTATCCAACAACCTCAGAAACAAGTTAATGATTGGCCAGCACAGGAAAGTTTTGTGATTCCTCGCGAAGATGAGCCGCCATCTATTGACACAAGAGCACCAACACCTCGAAAAACCTATCCTTTCATGTCGAAAGATGCAGAAAAAATGCAACAGTTGCGGCAAAGTAAAGCATTTTATAGCGGGTGGGATGGAGATCAGCAGCAGCAACATCAGCATCATCatcagcagcagcagcaacagcagcaacaacaacaacagcaacaaacTCATCATCATCGCCATCAGTACCAATCATCAGTCCCTCGCACTTTCTATGAACAGAGCAATGAGACAACTAATGAGGTATTTTTTGGGGCAGTGCAGGAACAGGAGGGGAAAAAGGAATCTGTGGTCATCACTCCAGTTGGATACGGAGGCTCACTGTACGAACATCGCGATATGTGGTCTCGAATGAGTTCCATGGGTTATAATTACTCCCATAAGTATTGA 1551 0.423 MGKQFLLLALILHLHFATLSAAPSNSSPAKIVSGFLSNAVPAFTKWVWSLKATTKTGVLSKSMMKFESGYNVETVFDGSKLGIEPYAVEVLHNGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGRLREARMNHPKGITVDDRGNIYVADTTNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLVVDRGNQAIREIPLHFDDCAYRYGSDFPLGIAMLVGAGFFGYMLALLQRRLGAIVESQDAQVSATVMPSVSPSPYEKPLKSVRPPLIPSAYEPEKQEEGFFGSLGKLLSNTGVSMVEIMGGLFPVFRRRPQSYKYQRQTLIQQPQKQVNDWPAQESFVIPREDEPPSIDTRAPTPRKTYPFMSKDAEKMQQLRQSKAFYSGWDGDQQQQHQHHHQQQQQQQQQQQQQQTHHHRHQYQSSVPRTFYEQSNETTNEVFFGAVQEQEGKKESVVITPVGYGGSLYEHRDMWSRMSSMGYNYSHKY 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03204 516 PANTHER - 1 513 - -
Tsu04g03204 516 MobiDBLite consensus disorder prediction 371 396 - -
Tsu04g03204 516 MobiDBLite consensus disorder prediction 417 454 - -
Tsu04g03204 516 Pfam NHL repeat 143 168 IPR001258 GO:0005515
Tsu04g03204 516 Gene3D - 28 227 IPR011042 -
Tsu04g03204 516 SUPERFAMILY NHL repeat 71 229 - -
Tsu04g03204 516 PANTHER NHL REPEAT PROTEIN 1 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03204 Tsu-Chr4 40410621 40414740 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03204 - - mtr:MTR_8g063760 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03204 04 40410621 40414740 Tsu04g03204 04 40410621 40414740 ECH