Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03185 ATGCATCCATCTTCATTTTTAGACAAGGatgaaaagggtaaaattgtctCTGTGAAAGAGTACAGAGGTATCATTGGATCTCTGTTGTACTTAACTACTAGTAGACCAGATATTGTTTTTGCAGTAGGTCTATGTGCACGTTTTCAAGTTTCCCCTAGGGAATCTCATTTGACAGCAGTAAAGAGAATATTCAGATATCTTGTCGGTACTACTAATATTGGTCGTTGTCGTTCTCAGCGAATCTTAGCTGGAGCTGGAACCAAAAAATCTCAAAGTAATGCTGAATGCATTTACATTACTTGTGAGACTACTGATGAAGAAGTTGATCCACATGATTCGTCATCTAGTTCAACCTCTAAGTCATCAAAAACCCTTTCTGATTCATCACCAAATACTTCAATTTCTTCCGAAAAAACTCCTTCTCCAAAAACCTCAAAACCTGTTTTCGCCAAAGATGTTAAGGGAGAAGGCAAAAACATTTCTGAAGAAACTGAATCGGTTGAAGCTCAACCAAAgaaaagatttagacaaaaaaGAATCAATGAGTTAGTGAAAGATAAAATCCCTCTGTTTGGAAAGATTGATGAAAAGAAATTCAGAAAAAAGTGGAGAACCAGACCTATAGCTGCTGGACGATTCTTCAATCTTAAAGCTTTGGAAAAGCATGAGCTAGACCTCAAGTATTACACTGATTATCAAGGTTGGTCCTCTTTCCTTCAGATTCAGGAAATCTACTATCCTAGCTTAGATTGTAGTGTCTGGAAAGGACCTATATGTAGTGATTTAGTGAAAATGTCTGCAATTTGTTCCTTGGAGGCAACAGAAACAAGTGAccaaaatcaaacttttttgcCAGAAGATGAGTTTCATAAGTTGAAAAGAACAATAGGAATTCATCTTCACAAGATCAACAAGCCTTTTGTAAAGACAATTCAGAGTCCTGATGGTGATATCATAGACTGTATTATATCTCATAAACAACCAGCATTTGATCATCCTCGACTGAAAGAACAAAAACCATTGGATCCTCCGGAAAGACCAAAGAGACATAATCAgatgaatattttgaatgaaaattttcaattgTGGAGCTTATCGGGTGAATCATGTCCCAAAGGAACGGTTCCAATTAGAAGAATAAAAGAAGAAGACATGTTAAGAGCTTCCTCTATTAACACATTTGGAAGAAAATTAAAACGTGTTAGAAGGGACACCATTGGCAATGATGGACATGAGTATGCAATTGGGTATGTGAGTGGGGATGAATACTATGGAGCAAAAGCTAGCATAAACGTGTGGGACCCACAACTGGAAAGTCCAGATGAATTCAGCTTGTCTCAAATATGGATCACAACTGGTTCTTTTGAGAAAGATCTCAATACTATTGAAGCTGGTTGGCAGGTCAGCCCAGAGCTCTATGGGGATAGCTATCCTAGATTCTTTACTTATTGGACGAGTGATGATTATCAAGGAACTGGGTGCTACAATTTACTTTGCTCTGGCTTTGTTCAAACTAGTAGTAAAATTGCAATTGGAGCTGCAATTTCTCCAACTTCTACATATAATGGAGGGCAATTTGATATTAGCTTAATGATATGGAAGGATCCAAAGAATGGAAATTGGTGGCTTGAATATGGATCCGATGGGGAAATAATTGGATATTGGCCATCCTccttgttcacacaattaaagGATCATGCAACTATGGTTCAATTTGGTGGAGAAATAGTGAATTCAATGTCAACAGGTGCTCACACTTCCACCCAAATGGGTAGTGGACATTTTTCAGAAGATGGTTTTGCAAAAGCTTCATACTTTAGAAATATGCAAGTTGTAGATTCTGATAATAGCTTAATTCCTTTGCCAAATCTCAAAGTTATAGCTAACAATCCAAATTGTTATAATATACAAGAAGGGACTAATAATGGGTGGGGAAATTACTTTTACTATGGTGGACCGGGGAGGAATGTGAATTGTCCCTAA 1983 0.3575 MHPSSFLDKDEKGKIVSVKEYRGIIGSLLYLTTSRPDIVFAVGLCARFQVSPRESHLTAVKRIFRYLVGTTNIGRCRSQRILAGAGTKKSQSNAECIYITCETTDEEVDPHDSSSSSTSKSSKTLSDSSPNTSISSEKTPSPKTSKPVFAKDVKGEGKNISEETESVEAQPKKRFRQKRINELVKDKIPLFGKIDEKKFRKKWRTRPIAAGRFFNLKALEKHELDLKYYTDYQGWSSFLQIQEIYYPSLDCSVWKGPICSDLVKMSAICSLEATETSDQNQTFLPEDEFHKLKRTIGIHLHKINKPFVKTIQSPDGDIIDCIISHKQPAFDHPRLKEQKPLDPPERPKRHNQMNILNENFQLWSLSGESCPKGTVPIRRIKEEDMLRASSINTFGRKLKRVRRDTIGNDGHEYAIGYVSGDEYYGAKASINVWDPQLESPDEFSLSQIWITTGSFEKDLNTIEAGWQVSPELYGDSYPRFFTYWTSDDYQGTGCYNLLCSGFVQTSSKIAIGAAISPTSTYNGGQFDISLMIWKDPKNGNWWLEYGSDGEIIGYWPSSLFTQLKDHATMVQFGGEIVNSMSTGAHTSTQMGSGHFSEDGFAKASYFRNMQVVDSDNSLIPLPNLKVIANNPNCYNIQEGTNNGWGNYFYYGGPGRNVNCP 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03185 660 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 266 660 - -
Tsu04g03185 660 MobiDBLite consensus disorder prediction 149 172 - -
Tsu04g03185 660 Pfam Neprosin activation peptide 310 417 IPR025521 -
Tsu04g03185 660 Pfam Neprosin 441 653 IPR004314 -
Tsu04g03185 660 Gene3D - 435 555 - -
Tsu04g03185 660 MobiDBLite consensus disorder prediction 106 172 - -
Tsu04g03185 660 PANTHER - 266 660 - -
Tsu04g03185 660 MobiDBLite consensus disorder prediction 114 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03185 Tsu-Chr4 40027625 40037761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03185 1 74 Receptor kinase-like Gene Family AT4G23160 40.541 1.77e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03185 - - gmx:100792240 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03185 04 40027625 40037761 Tsu04g03185 04 40027625 40037761 ECH