Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03156 ATGGATTCAAATAGATTCTCATTCTCAGAACCATTTCTATCACACAGAAGAAAAGTTTTTTCTGGTTTTAGTTTATGTATTGGAGCTTCTTTGATTTTAtgttctcttttctttcttagtAATTCCCTTAATGTTCCTAAAAATTCTGTCTTTCTTCCTGTTTTCAACAGTTTTAACACAAattcttcatttgtttcataCCCCTTTTCTGTTAATAGTACTACTAACCACTCTTGTTTTTCTCAGAATAATGATTATGAGAACTCTCTTaagagaattgaagaagaaagtgttgtTGTAGGTAATAGAATTAGTGAAGTTAATGTTTCAAGTGTTGGAGTAGGAACACATAGTTTTAGTCCTAATAATGTTAGGAATGTACCACCGGTAGGGTCTAGCGCAAGTGGTTGGTGCACAGAGTGTGTCAGGGTAGTAAACTCTGGAGTACCGAGTTCGATTcctaatgataaaaaaaatgtgagtttTGTGAAGAACAATGTGACTAATGATGTTTCATACAATGCAAATACTAGTAGTATTGAGGTAGGGAATGAAGGTGATTTGGTTAGGGATAAAAATGTAACTTTACTCACTCATAGTAATGACCAAATGGAGAAAATGAAGGATGGTTTGTATGAAGAGTGTGATATCTTTGATGGAAAGTGGGTAAGAGATGATTCAAAGCCATATTATCCTTTTGGTTCTTGTCCCTTCATTGATAGAGATTTTAATTGTCATCTTAATGGGAGGCTTGATCTTGAATATGTTAAATGGAAGTGGAAGCCAAATAAATGTCACATTCCAAGTTTGAATGCAACTGATTTTCTGGAGAGGTTACGCGGGCAGAGATTGGTTTTTGTCGGAGATTCATTGAACAGGAACATGTGGGAGTCCCTTGTTTGTATCCTTCGACAAAGTGTCCGAAACAAGGAAAGAGTTTTTGAAATTTCGGGGAAAAGAGAATTTAAAAAGAAAGGTGTATATGCTTTTAGATTCGAGGCAAAATTTATTCTGGTTTGGCTTTTTCAGGATTATAATTGTTCGGTGGATTTTGTTGCTTCACCATTCCTTGTTAGAGAATCAACTTTCAAAGGCAAAAATGGTTCATTTGAGACATTAAGATTGGATTTGATGGATCACACAACTACAAGGTATCAGGATGCTAATATTATAGTCTTCAATACCGGACATTGGTGGACACACGATAAAACGTCAAAAGGCGAAGATTATTATCAAGAAGGAAACCATGTACATCCAAGACTCAAAGCTTTGGATGCTTATATGAGGGCTTTGACGACTTGGGCTAAATGGGTTGACCGAAAAGTTAATGCCAATCATACACAAGTTTTCTTCCGAGGATACTCGGTTACTCATTTCTGGGGTGGACAATGGAATTCAGGAGGACAGTGCCACAAAGAAACTGAGCCAATATACAATGAAACTTACTTACAAAAGTATCCTTCAAAAATGCGCGCTCTTGATCATGTCATGCAAAATATGAAAACCAAAGTGGTATATATGAACATAAGTAGACTTACAGACTATAGAAAAGACGGGCATCCTTCGGTATATAGAAAAGATTATAAGACAGCAATGAAGCAGAACTTGTCTTCTCTATACGAAGATTGCAGCCATTGGTGCTTGCCCGGTGTACCTGATACTTGGAATGAATTGTTATATGTTTCGCTTTTAAAATATGGAAAGGGAGCTTGGAAGACCTGA 1722 0.3479 MDSNRFSFSEPFLSHRRKVFSGFSLCIGASLILCSLFFLSNSLNVPKNSVFLPVFNSFNTNSSFVSYPFSVNSTTNHSCFSQNNDYENSLKRIEEESVVVGNRISEVNVSSVGVGTHSFSPNNVRNVPPVGSSASGWCTECVRVVNSGVPSSIPNDKKNVSFVKNNVTNDVSYNANTSSIEVGNEGDLVRDKNVTLLTHSNDQMEKMKDGLYEECDIFDGKWVRDDSKPYYPFGSCPFIDRDFNCHLNGRLDLEYVKWKWKPNKCHIPSLNATDFLERLRGQRLVFVGDSLNRNMWESLVCILRQSVRNKERVFEISGKREFKKKGVYAFRFEAKFILVWLFQDYNCSVDFVASPFLVRESTFKGKNGSFETLRLDLMDHTTTRYQDANIIVFNTGHWWTHDKTSKGEDYYQEGNHVHPRLKALDAYMRALTTWAKWVDRKVNANHTQVFFRGYSVTHFWGGQWNSGGQCHKETEPIYNETYLQKYPSKMRALDHVMQNMKTKVVYMNISRLTDYRKDGHPSVYRKDYKTAMKQNLSSLYEDCSHWCLPGVPDTWNELLYVSLLKYGKGAWKT 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03156 573 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 12 571 IPR029962 GO:0016413
Tsu04g03156 573 Pfam PMR5 N terminal Domain 213 266 IPR025846 -
Tsu04g03156 573 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 267 560 IPR026057 GO:0016740
Tsu04g03156 573 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 2 12 571 IPR029967 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03156 Tsu-Chr4 39387302 39390054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03156 - - gmx:100811395 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03156 04 39387302 39390054 Tsu04g03156 04 39387302 39390054 ECH