Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03155 ATGACAACAATGAAAGTTAAGGAAAAAGAGCTAGATGAGCCCATCCACGGAGACATCTTAGAAGCCACACTCTCGCACGTGCCACTAATTTACTTGGTGCCAGCCAGTTACGTGTCAAAAGAATGGAACGGTGCTGTGTCGAGGTCCCTCCGCCACATCAACCCCGTGAAGCCGTGGCTCATGGTTCACACTCAAAACCCCCGTGCTCCTCACATAACCACAACCTATGCGTATGACCCACGCTCGCTAGTGTGGATTGAAATTCACCCGCCACAAATTAAACACACATCTGCTCTTCGATCCTCACACTCCACACTCCTTTACACGCTCTCTCCCACTGAATTTTCCTTCTCTATAGACCCACTCCACCTCACATGGCACCACGCATCATCACCACGTGTTTGGCGCGTTGATCCCATCGTTGCACACATGGGAAACCACATCGTGGTTGCTGGTGGCGCGTGTGACTTTGAGGATGATCCTTTAGCGGTGGAGATGTATGATATAGAGTCTCACAATTGGATCAAATGTCCGTCGATGCCTGAGATGATGAAAGACACCACAACATTGGTGTGGCTCTCTATTGTTGTTGTCGGAGAGTTTTTGTACTTAATGGTGAAAAATACTGGCATAATGTACTCATTCAATTGTAAAACGATGATGTGGCAAGGACCATATGATCTGCGAGGGGATGAGAGTGTATTCTACTACGCAATGGGAGAAGTGGAGAATCGTTTGGTGGCGGTGGGAATATTAGGTGATGCGGAAAACGTGAAAGGAGTGAAAGTTTGGGAAGTAAAAGTGGAATTGAAGTTAGGATTGGGAATGGTGGAATTAGGTGTGATGCCGAAAGAGATGGTTGTCAAGCTGAGAGGTGAGAGTGGGAGTGAGCTGTTGAATTCGATTGAGTTGGTTTCAATTGGAAATTTTGTATATGTTTATAATGTGTTGGAACCAGAGGAGATGGTGGTATGCGAGGTGTTGAAGAGAGGAGGGTGTGAGTGGTGGAGTGTGAAGAATGCGGTGGTGAATGACGAAATGCGGATGAGAAGAATGGTGTTGTCGGGTGGTGATGTGGGATTGGAGGATTTGAAGAGTGCAGCATTGCGCaattgtaaatttgtattgaagcAATTAAAAGAGGTCGAAAGATGA 1155 0.4597 MTTMKVKEKELDEPIHGDILEATLSHVPLIYLVPASYVSKEWNGAVSRSLRHINPVKPWLMVHTQNPRAPHITTTYAYDPRSLVWIEIHPPQIKHTSALRSSHSTLLYTLSPTEFSFSIDPLHLTWHHASSPRVWRVDPIVAHMGNHIVVAGGACDFEDDPLAVEMYDIESHNWIKCPSMPEMMKDTTTLVWLSIVVVGEFLYLMVKNTGIMYSFNCKTMMWQGPYDLRGDESVFYYAMGEVENRLVAVGILGDAENVKGVKVWEVKVELKLGLGMVELGVMPKEMVVKLRGESGSELLNSIELVSIGNFVYVYNVLEPEEMVVCEVLKRGGCEWWSVKNAVVNDEMRMRRMVLSGGDVGLEDLKSAALRNCKFVLKQLKEVER 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03155 384 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 6 368 - -
Tsu04g03155 384 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 6 368 - -
Tsu04g03155 384 SUPERFAMILY Kelch motif 58 257 IPR015915 GO:0005515
Tsu04g03155 384 Pfam Kelch motif 141 181 IPR006652 GO:0005515
Tsu04g03155 384 Gene3D - 59 308 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03155 Tsu-Chr4 39346186 39347404 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03155 - - gmx:100799807 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03155 04 39346186 39347404 Tsu04g03155 04 39346186 39347404 ECH