LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu04g02929	ATGGCTGATAATAACAGTTTCGGTGTAATAGGTTACGCGTTAGCACCCAAGAAACAAAACAGTTTCATCCGCGACTCACTCTTAACGCTTGCAAAATCACGCGGAATCCAACTCGTCCGAGTCGACTCAAATCGTTCTTTAGCAGATCAAGGACCGTTCGATTGTATTCTCCACAAACTCTACGGTGACGATTGGAAACGCCAGCTTCAAGAATTTCAAACGAAAAATCCAAATGCTGTTATTCTCGATGCTCCTGAAGCGATCGAACGTCTTCACAACAGAATTTCAATGCTTCAGGTTGTTTCTGAACTTAGGGTTGATGACCGAACCGAAACGTTTGGGATCCCGAAACAGATTGTGATTTACGATAAAGAAACTCTGTCTGATGGTCAGGCTTGGGAGAGTTTGAAGTTTCCGGTGATTGCAAAACCGCTTGTTGCCGATGGTAGCGCGAAATCGCATAAAATGGCTTTGGTTTTTAGTCATAATGCTTTGAATAAGCTGAAACCACCGATTGTTTTGCAAGAGTTTGTTAATCATGGTGGTGTTATTTTCAAAGTGTATGTTGTCGGTGAGCATGTTCGTTGCGTGAAGAGGAAGTCTTTACCTGATGTTTCAGAGGAAAAAGTGTTGGGGGTTTCGGAAGATTTGTTGTCGTTTTCACAGGTTTCAAATTTGGCAAATCGTGATAGTGTGGATGATGATGAGAAGTTTTATCAGATGATGAATTTGGATGATACTACTGAGATGCCACCTCAAGCTTTTATTGTTGATATTGCTAGTGGATTGAGGCGTGCTATGAAGCTGAATCTATTCAATTTCGATGTGATTCGTGACTCTAGATATGGAAATCGGTATCTTATTATTGATATCAATTACTTTCCTGGGTATGCTAAAATGCCGGGGTATGAAAGCGTTTTGACCGATTTTTTCGTTGATTTAATGCACAAGAAAGAGATCGAAGCTGAAGAGGGTAATGTGGCAAATATTGATGGTGGTGAAGAGGCTTTAACCgaagaaaaagatgaatctGTTAAGGTTTAG	1044	0.4013	MADNNSFGVIGYALAPKKQNSFIRDSLLTLAKSRGIQLVRVDSNRSLADQGPFDCILHKLYGDDWKRQLQEFQTKNPNAVILDAPEAIERLHNRISMLQVVSELRVDDRTETFGIPKQIVIYDKETLSDGQAWESLKFPVIAKPLVADGSAKSHKMALVFSHNALNKLKPPIVLQEFVNHGGVIFKVYVVGEHVRCVKRKSLPDVSEEKVLGVSEDLLSFSQVSNLANRDSVDDDEKFYQMMNLDDTTEMPPQAFIVDIASGLRRAMKLNLFNFDVIRDSRYGNRYLIIDINYFPGYAKMPGYESVLTDFFVDLMHKKEIEAEEGNVANIDGGEEALTEEKDESVKV	347

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu04g02929	347	PANTHER	INOSITOL-TETRAKISPHOSPHATE 1-KINASE	1	329	-	-
	Tsu04g02929	347	PIRSF	ITPK	1	327	IPR008656	GO:0000287\|GO:0005524\|GO:0032957\|GO:0047325\|GO:0052725\|GO:0052726
	Tsu04g02929	347	Pfam	Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain	9	88	IPR041429	-
	Tsu04g02929	347	Gene3D	-	86	296	-	-
	Tsu04g02929	347	Pfam	Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain	109	312	IPR040464	-
	Tsu04g02929	347	ProSiteProfiles	ATP-grasp fold profile.	105	321	IPR011761	GO:0005524\|GO:0046872
	Tsu04g02929	347	PANTHER	INOSITOL-TETRAKISPHOSPHATE 1-KINASE	1	329	IPR008656	GO:0000287\|GO:0005524\|GO:0032957\|GO:0047325\|GO:0052725\|GO:0052726
	Tsu04g02929	347	SUPERFAMILY	Glutathione synthetase ATP-binding domain-like	85	299	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu04g02929	Tsu-Chr4	35612648	35614203	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu04g02929	K00913		-	gmx:100127430	531.561

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu04g02929	04	35612648	35614203	Tsu04g02929	04	35612648	35614203	ECH