Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02856 atggaTCCAAAACAGtttcaaattgaaacaaattcGGATCCTAATCCATCAACTGATGTTTATCATCTTGCTCTTGATATTGGAGGATCTCTTGCCAAGCTAGTATACTTCACAAAAGATGATGATCATTTTGTGGATGGAAAGGCAGAGATATCTCCTAGAAAGACTTCAGATAAATCCAAAGGCAGTAGTAGGAACCATCCTGTTCTTAAAGGAAGGCTTAATTTTAAGAAGTTTGAAACAAGCAAGATAAATGATTGTATAGATTTTATCAAGACCATGAAACTTCATCTTGGAGGTGATCAGCAGCAAGAAAATCCTGGAAGTCAGCCAATATCTGTTAAGGCAACAGGTGGTGGTTCATACAAATATGCAGACCTCTTCAAGGAAAGGCTAGGGATAATTCTTGACAAGGAAGATGAAATGGACTGTCTTGTTGTAGGATCAAATTTTCTTCTCGAGGTAGTCGACCGAGAAGCGTTTACCTATATGAGTGATCAAAGGCAATTTATGCAGATAGACCAAAATGATCTGTATCCCTATCTTCTCGTTAATATTGGGTCTGGTGTTGGCATGATCAAGGTGGAAGGAGATGGAAAGTTTGAGCGAGTTAGTGGAACAAGTATAGGTGGAGGCACTTTCTGGGGTTTAGGAAAGCTTTTAACTAAATGCAAGAgTTTTGATGAGTTGCTGGAATTAAGTTACCAAGGCAACAACAGAGCGGTAGATATGCTTGTCGGAGATATTTATGGTGGAATGGATTATGCCAAAGGTATGACTAGTGAAACAATAGCCTCTAGTTTTGGAAAGGCAATGTCTGATAGTAAGGAGCGTGAAGATTATAAACCCGAAGATATTGCTCGATCTCTTCTAAGAATGATTTCAAATAATATTGGACAGATATCTTACTTGAATGCCCTTCGATTTGGGCTGAAGAGGATattttttggtggattttttatTCGGAGGCATCCTTTTACAATGGATACACTATCTGTTGCCGTTAATTTCTGGTCTAAAGGTGAAGCGAAAGCAATGTTCTTGCGGCATGAAGGATTTCTTGGAGCTATGGGTGCCTTCATGAGTTCTGATAAACATGGCCTCAAGGAATTATTGGTCAAACAAGAGACCCAACAAAGTACCACCAAGTTATCCTTTGCTGTTGATAAAATGCATTGGCCACTAGATGGGGAATTAAATGGAGAGGAAAGTATAGAATGTAGTGTCTATGTAACTTAG 1239 0.3785 MDPKQFQIETNSDPNPSTDVYHLALDIGGSLAKLVYFTKDDDHFVDGKAEISPRKTSDKSKGSSRNHPVLKGRLNFKKFETSKINDCIDFIKTMKLHLGGDQQQENPGSQPISVKATGGGSYKYADLFKERLGIILDKEDEMDCLVVGSNFLLEVVDREAFTYMSDQRQFMQIDQNDLYPYLLVNIGSGVGMIKVEGDGKFERVSGTSIGGGTFWGLGKLLTKCKSFDELLELSYQGNNRAVDMLVGDIYGGMDYAKGMTSETIASSFGKAMSDSKEREDYKPEDIARSLLRMISNNIGQISYLNALRFGLKRIFFGGFFIRRHPFTMDTLSVAVNFWSKGEAKAMFLRHEGFLGAMGAFMSSDKHGLKELLVKQETQQSTTKLSFAVDKMHWPLDGELNGEESIECSVYVT 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02856 412 MobiDBLite consensus disorder prediction 48 69 - -
Tsu04g02856 412 SUPERFAMILY Actin-like ATPase domain 131 361 IPR043129 -
Tsu04g02856 412 PANTHER PANTOTHENATE KINASE 4 411 IPR004567 GO:0004594|GO:0005524|GO:0015937
Tsu04g02856 412 MobiDBLite consensus disorder prediction 48 65 - -
Tsu04g02856 412 Gene3D - 242 352 - -
Tsu04g02856 412 SUPERFAMILY Actin-like ATPase domain 21 157 IPR043129 -
Tsu04g02856 412 Pfam Fumble 22 361 IPR004567 GO:0004594|GO:0005524|GO:0015937
Tsu04g02856 412 PANTHER PANTOTHENATE KINASE 4 411 - -
Tsu04g02856 412 TIGRFAM panK_eukar: pantothenate kinase 22 362 IPR004567 GO:0004594|GO:0005524|GO:0015937
Tsu04g02856 412 Gene3D - 15 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02856 Tsu-Chr4 34457392 34462534 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02856 K09680 - gmx:100782208 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02856 04 34457392 34462534 Tsu04g02856 04 34457392 34462534 ECH