Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02838 ATGCATAGACACTCCCTTTTTCTCTCTTGTATTCTTCTCTCCACACTCACTGTTGGTTTAGCAGTGGATCATGCAGGAGACAATAACCAAAATCCATTCGCTCCAAAGGCGTTTGTAATTCGTTATTGGGACAGAGTCATTAAAAACAACTTACCAAAGCCATCTTTCATTCTCTCTAAGGCGTCGCCGCTAAGCGCGGCCGACGCATCAGCCTTTGCGAAACACGCAGCCGCCAACACACTTTCAACAAAGCTGCCGGAGTTCTGCTCGGCGGCACACCTCCTCTGTTTCCCTGAAGTAAATCCCAGCCTAAAAAAACACTCCCAGGATGGAGATTTCTCCGTCTACAACGACGCTCAGAATTTCACCAACTACGGAACAGAAAGACCTGGAGGAATCGATTCTTTCAAAAATTACTCCAACGGTTTCGAAAGCAATCCGGTAAACGAATTCCGGCAATATAGCCGGAGTGCCGCCGGTCATAATGACAGTTTCACAAACTACGCTATCGAAACAAACGTTGCGGATCAGAATTTCAATACCTACGGTTCCGGCGCCGCTGGTGGTTCCGGCGAATTCAAAGAATACGCCGAAGACACCAACGTCCCGAACCTCCGTTTCACAACTTACTCCGTAGGTGTTGCCGGAAGAGAACAATCGTTCAATAGTTACAGTGAAAACGGAAACGCCGGCGATCAGAGTTTCGGAAATTACGGAAAAGACTCCGCCGGTGCTCAAAACCGTTTCACGGAATACGGAACGAACTCTAACGTTGCGTCGTCAGGTTTTTCTAGTTATGCGGATAAAGGTACAGGTGATGAAGACACGTTCGTTAATTACGGCGTTAATATGAATAATCCAactgaaaatttcaaaaattacgCTAGAGGAAGTACAGGTGGTGTTGAAAAATTCTCTAATTATAGAGATCAAGCTAATGTTGGTGCTGATTCGTTTAGTAATTATGCTAAGGGATCAACAGGTGGGACCCAGGTTGATTTTGATAACTATGGAAAATCATTTAATGAAGGAACCGACACTTTCAAAGGGTATGCTAAAGGTGCTGATGCAGATCACAAGGTAACTTTTAAGGGTTATGGTGTTAATAACACTTTCAAGGATTATGATAAAAAAGGGATTTCTTTTGCTAAGTATACTaatgcttcttcttcttccactaATTCTGTTAGTGATAGTGGtagtttggtaaaaaaatgggTTCAACCGGGTAAGTTTTTTCGCGAAAAGATGTTGAAACAAGGTGTGATTATGCCTATGCCTGATATTAAGGATAAATTACCACAAAGGGCATTTTTGCCTCGTACCATTTTGACTAAATTGCCTTTTGCATCTTCTAAGTTGAATGAGTTGAAGCAGGTGTTTAAGGTGTCTGACAATTCGTCTATGGATAAGATGATAGTGGACTCGTTAAGTGAATGTGAGAGGGCGCCGAGTATGGGTGAGACTAAGCGTTGTGTAGGTTCGCTTGAGGATATGATTGACTTTGCAACTTCTGTTATGGGGCACAATGTTACGGTTAGGTCGACTGAGAGTGTGAATGGATCAGGCAAGAATGTTATGGTGGGTCGTGTTAGAGGGATAAATGGGGGAAAAGTAACTGAATCTGTGTCATGTCACCAGAGCTTGTTTCCTTATTTGTTGTACTACTGTCACTCGGTTCCGAAGGTTCGGGTTTATGAGGCTGATCTTTTGGACCCTGAGTCTAAGGTTAAGATTAACCATGGTGTTGCTATTTGTCACTTGGATACAACTGCTTGGAGCCCCAGTCACGGTGCATTCATGGCTCTTGGATCTGGTCCAGGTCGAATTGAAGTGTGTCATTGGATCTTTGAGAATGACATGACTTGGACTACTGCAGACTAA 1884 0.4236 MHRHSLFLSCILLSTLTVGLAVDHAGDNNQNPFAPKAFVIRYWDRVIKNNLPKPSFILSKASPLSAADASAFAKHAAANTLSTKLPEFCSAAHLLCFPEVNPSLKKHSQDGDFSVYNDAQNFTNYGTERPGGIDSFKNYSNGFESNPVNEFRQYSRSAAGHNDSFTNYAIETNVADQNFNTYGSGAAGGSGEFKEYAEDTNVPNLRFTTYSVGVAGREQSFNSYSENGNAGDQSFGNYGKDSAGAQNRFTEYGTNSNVASSGFSSYADKGTGDEDTFVNYGVNMNNPTENFKNYARGSTGGVEKFSNYRDQANVGADSFSNYAKGSTGGTQVDFDNYGKSFNEGTDTFKGYAKGADADHKVTFKGYGVNNTFKDYDKKGISFAKYTNASSSSTNSVSDSGSLVKKWVQPGKFFREKMLKQGVIMPMPDIKDKLPQRAFLPRTILTKLPFASSKLNELKQVFKVSDNSSMDKMIVDSLSECERAPSMGETKRCVGSLEDMIDFATSVMGHNVTVRSTESVNGSGKNVMVGRVRGINGGKVTESVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPESKVKINHGVAICHLDTTAWSPSHGAFMALGSGPGRIEVCHWIFENDMTWTTAD 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02838 627 Pfam BURP domain 412 624 IPR004873 -
Tsu04g02838 627 SMART BURP_2 410 626 IPR004873 -
Tsu04g02838 627 ProSiteProfiles BURP domain profile. 412 626 IPR004873 -
Tsu04g02838 627 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 3 627 - -
Tsu04g02838 627 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 3 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02838 Tsu-Chr4 34022172 34024772 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02838 - - gmx:100811362 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02838 04 34022172 34024772 Tsu04g02838 04 34022172 34024772 ECH