Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02836 ATGCAGGTTAGTTTGATGGTAGATTCTGTAGAAATGAAAAACCAAAACCAGTTCACTCCAAAGGCCTTTGTAATTCGTTATTGGGATAGAGTGATAAAAAACAACTTACCAAAGCCATCTTTCATTCTCTCTAAGGCGTCACCCCTTAGTGCCGCCGACGCATCTTCATTTGCAAACTACGCGAGCGCCAACACACTATCCACAAAGTTACCGGAATTCTGCTCTGCCGCAAACCTCCTCTGCTCCCTGGATATAAATCCACAAAGTTATCGTAAAGGAGTTGATTTAGACAAGAAGCTTAGCTTCGCAAGTTACGGTATTACTCACCCTTTCGAAGATTACATAAGAAAAGGTTTGTTATTCCCCATCTACACTAAATCTTCTTCAAATAACTCTATTACCAGTTTGGGAAAAAATTCGTTTCGGTCGGGTATGTTTTTCCGCGAAAAGATGTTGCAGCAAGGGATGGTTATGCACATGCCAAATATAAGGGACAAATTACCAGAAAGATCATTTTTGCCTCGCTCAATATTGATCAAATTGCCCTTTGCATCTTCCAAGTTAGACGAGATGAAGCAATTTTTCAAGGTGTCTAAGAATTCTTCTATGGAAAAGATGATAGTGAACTCATTGAGAGAATGTGAGAGAGTGCCGAGTAAGGGTGAGGTCAAGCGTTGTGTGGGTTCGCTTGAGGATATGATTGACTTTGCAACTTCTATTTTGGGCAGCAATGTAACGGTTCGATCCACTGAGAATGTAAATGGgtcaaataaaaatgttatgttGAGTCAAGTTAGAGGAATAAACCATGGGAAAGTTAAAGAGTTTGTATCTTGTCATCAGACCATGTTTCCTTACTTGTTATACTACTGCCACTCAGTTCCCAAGGTTCGAGTTTATGAAGCGGATCTTTTGGACCCTCAATCTAAGGTCAAGATTAATCGTGGTGTTGCAATCTGCCACTTGGACACAACAGCTTGGAGCCCCACCCATGGTGCATTTGTGGCACTTGGATCTGGTCCGGGTCGCATTGAAGTGTGTCACTGGATCTTTGAAAATGATTTGATTTGGACTATCGCTGATTGA 1086 0.4088 MQVSLMVDSVEMKNQNQFTPKAFVIRYWDRVIKNNLPKPSFILSKASPLSAADASSFANYASANTLSTKLPEFCSAANLLCSLDINPQSYRKGVDLDKKLSFASYGITHPFEDYIRKGLLFPIYTKSSSNNSITSLGKNSFRSGMFFREKMLQQGMVMHMPNIRDKLPERSFLPRSILIKLPFASSKLDEMKQFFKVSKNSSMEKMIVNSLRECERVPSKGEVKRCVGSLEDMIDFATSILGSNVTVRSTENVNGSNKNVMLSQVRGINHGKVKEFVSCHQTMFPYLLYYCHSVPKVRVYEADLLDPQSKVKINRGVAICHLDTTAWSPTHGAFVALGSGPGRIEVCHWIFENDLIWTIAD 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02836 361 Pfam BURP domain 145 358 IPR004873 -
Tsu04g02836 361 ProSiteProfiles BURP domain profile. 146 360 IPR004873 -
Tsu04g02836 361 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 95 361 - -
Tsu04g02836 361 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 12 92 - -
Tsu04g02836 361 SMART BURP_2 144 360 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02836 Tsu-Chr4 33954045 33955130 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02836 - - mtr:MTR_8g064500 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02836 04 33954045 33955130 Tsu04g02836 04 33954045 33955130 ECH