Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02830 ATGGaggaacaacaacaacaaccgcaACAACGGAAAGGTATTCCTCTCGACTTGGATACTCTCCTCGATGATACTCCGGCGGCGGAACTCGTCGTGAAACCCTCTGCTATGGCGTCCGATCAGGAGCCTCAGTCCGTCGTACTCGGCCTCGAAGAACTCAAAGATTACGAGCTTGATGAACAGATTCGGAGAAAGAAGAATACTCTCAATACCTCCGGTAAAAACTTGCCGGACCGAGGTGCCAAACTTCGCGCTGTCATCAGGTGCTATGAAGAAGAGGTTCTTAGACGGAAACTTAACCCTCCTCCGCAGAAAGTTAATGAGAAGCAGGCTACTACCAGCTCAGATTCAGTCGGTGTGTCTAATAAATCGAGACGAGAGAATTTGCCATCTCATCCACAGTCAGAATCCTCTTTTGCATCTTGCTTTCTGAAGAAATTGGATGATAAAACTAATTCTACAGCTGTTGATGCATTTAGCAATGAGAAGCAACATTTCCAGCATTGCAACAACCAGACAGTACGACCCAACAGAGAACATAAAAGACGAAAGAGACATCAATCATCTTCAAGACAATTGCCAGTTAAATGCTCCAGGAAACTTCCCATACGTGATACTCTTAGTGATGATAAAAGGTGCCAAGCGAATTCTGTTTTATCCTTACAGACTGTTACAAGGAATCTAGATAGACGCCTCTCAAAAAATAAGGGTGCTTCTCAGGCAATTCAGTCAGATGGCTCAAGGTCCAGGAAGGGTcaacccattgttgttgatgaCGATGAGGACGATGATGACAGCGAAGATCCTTATATTATAgagaaaacagaaaacaaagTTCCTGAATATTTGAAAGAAGCTAAGGTCTATTTTCCATCAAGAGATGATCCCGAGTGTGTTGAAATTTGTTACAACGACATGGAGTGCCTTGCTCCTGAAGGCTACTTAACATCAACTATCATGAACTTCTATATGCGATATTTGCAGCAGCGAGTGCTGACAATATTAGACTGCTGCCATTTTTTCAACACATATTTCTACAAGAAACTTACAGAAGCTGTATCGTGCAAGGAAAGTAACAGAGAGACAATCTTTGCAAAGTTCAGGAGGTGGTGGAAGGgtgtaaatatttttcaaaaggcATATGTTTTGATTCCAGTACACCAGGATGCTCATTGGAGCTTGATCATTATATGTATCCCAGACAAAGAAGATGAATCAGGACCGATCATACTTCATTTGGATTCTTTGGGTCTTCACTCAAGTAAATCAGTTTTTGATAATATTAGAAGctatttgattgaagaaaagaACTATTTGAGTCGAGAGTGTGCTTCTTCAGATGTTCCAATTGCAGACAGAATATGGAAGTCTCTTTCTCGTAGAATTGAAACTCAAGTCATACCCGTTCCCCAACAGAAGAATGAGTATGACTGTGGTCTATTTGTATTATACTTCATTGAGCGTTTCATGGAAGAGGCACCCGAAAGACTGAAAAAGAAAGATTTAGCAATGTTTGGCAGGCGGTGGTTCAAAGCTGAAGAGGCATCCAATTTGAGAGCAAAAATCCACAAGTTGCTTGTAGCAGAACTACATAATTCCATCAAGCCTAACAACATAACAGCATCTTCTCCTTCATCTGCTGCCAATGCAACTGAATGCGTTGAGACTGCCAAGGACTCTTCGACCAAGGACTCTTCAATCGAAGATGATGGCGTCATGAGTTGTGATTCTGAAATAATTGAAAAGGTGGATGGAATTTTGGTATAG 1767 0.3962 MEEQQQQPQQRKGIPLDLDTLLDDTPAAELVVKPSAMASDQEPQSVVLGLEELKDYELDEQIRRKKNTLNTSGKNLPDRGAKLRAVIRCYEEEVLRRKLNPPPQKVNEKQATTSSDSVGVSNKSRRENLPSHPQSESSFASCFLKKLDDKTNSTAVDAFSNEKQHFQHCNNQTVRPNREHKRRKRHQSSSRQLPVKCSRKLPIRDTLSDDKRCQANSVLSLQTVTRNLDRRLSKNKGASQAIQSDGSRSRKGQPIVVDDDEDDDDSEDPYIIEKTENKVPEYLKEAKVYFPSRDDPECVEICYNDMECLAPEGYLTSTIMNFYMRYLQQRVLTILDCCHFFNTYFYKKLTEAVSCKESNRETIFAKFRRWWKGVNIFQKAYVLIPVHQDAHWSLIIICIPDKEDESGPIILHLDSLGLHSSKSVFDNIRSYLIEEKNYLSRECASSDVPIADRIWKSLSRRIETQVIPVPQQKNEYDCGLFVLYFIERFMEEAPERLKKKDLAMFGRRWFKAEEASNLRAKIHKLLVAELHNSIKPNNITASSPSSAANATECVETAKDSSTKDSSIEDDGVMSCDSEIIEKVDGILV 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02830 588 PANTHER UBIQUITIN-LIKE PROTEASE 4 50 551 - -
Tsu04g02830 588 SUPERFAMILY Cysteine proteinases 291 528 IPR038765 -
Tsu04g02830 588 MobiDBLite consensus disorder prediction 98 136 - -
Tsu04g02830 588 MobiDBLite consensus disorder prediction 230 270 - -
Tsu04g02830 588 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 50 551 - -
Tsu04g02830 588 MobiDBLite consensus disorder prediction 538 570 - -
Tsu04g02830 588 MobiDBLite consensus disorder prediction 161 201 - -
Tsu04g02830 588 MobiDBLite consensus disorder prediction 230 250 - -
Tsu04g02830 588 Gene3D - 290 527 - -
Tsu04g02830 588 ProSiteProfiles Ubiquitin-like protease family profile. 299 489 IPR003653 GO:0006508|GO:0008234
Tsu04g02830 588 MobiDBLite consensus disorder prediction 105 136 - -
Tsu04g02830 588 MobiDBLite consensus disorder prediction 538 556 - -
Tsu04g02830 588 Pfam Ulp1 protease family, C-terminal catalytic domain 314 514 IPR003653 GO:0006508|GO:0008234
Tsu04g02830 588 Gene3D - 338 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02830 Tsu-Chr4 33740618 33752436 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02830 K16287 - gmx:100790705 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02830 04 33740618 33752436 Tsu04g02830 04 33740618 33752436 ECH