Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02762 ATGGCTGTGTTGCTGCAAACACATTACGCTCTATCTTTACCTTCACCACGTTACTCTTATCACTTCTCAATTCCAAATCCAAACCCTAACTCTTTATCTCTTCTAATCCTCCCCAAACATTCCAATTCCCAATTGCAATTTTCCAGTCACCGGACTCCGACACACCGTTCGCCGCCGTCATCCGTCTCCGTCTCCCTCCGGGAACCTTCACAAACGTCGCCTTTCAAGTTGCCACAGGCTTTCGTGAGTGTCTCCGTCTCCGTCGCGCTGTTTCTCTGCTGTGGCATTCGCGCTTGTTCGGCTTCTTTGCCTCCTCTAACCACTGTGGTTCAGCAGGAACAAACAATTCAAGATGATAATGATGCAAGGAACCATGATGACAAGgaaaatatagatatagataaggAATTAGAAGCATCTTTTAATGCATGGAAATCTAAAACGTATGCATTGACGGTTCCTTTGAAAGTTGTTGCTTTGCGCGGCTCTATTCCTCCTTCATGGATCAAGgACTTCATAAATTCTCAAGGGAAAAGAATGAAGTTTAACGTGAAGTATCATGAAAGTCTTGAGAGTATCTTCTCTGATCTATCCCTTCCCTTTAGCAAAGAAAATCATGGCCCAACGTCTACTTTGGCAGCTGATATTGTTGGTATTGGTGATTCTTGGCTcaaatttgccattaaaaaagcGATAATTGAACCAATACAAGATGTAGAAGATAAGGAATGGTTTAAAAGTTTAGCTGAGAAATGGAAGGTATATTTACGCAGGAACTCTGAGGGAGAAATGGATCCTGAAGGTGATATATGGGCTGCCCCATATCGATGGGGCTGCATGGTAATAGCATACAagacaaataattttcaaaagcaTAAGTTGGCTCCAATAGAGGACTGGGCAGATCTGTGGCGGCCTGATCTTGCAGGGAGGATTTCCATGGTGAATTCTCCTAGAGATGTTGTTGGTGCAGTTTTAAAGTATATGGGGGCTTCCTATAATGTAAATGACATCAATTTGGAAGTAAATGGTGGGAGAGATGCTGTTAAGCATAATTTAGCATTGCTTGCAAAACAGGTTCGACTGTTTGATAGTGAAAACTATCTAAAGGCTTTTGGAGTTGGAGATGTGTGGGTAGCCGTTGGATGGAGTAGCGATATTATTCCTGTTGCTAAACGCATGTCTAATGTTGCAGTTATTGTTCCAAAGTCTGGAGCGAGTTTATGGGCAGATCTTTGGGCAATTCCTGCTGCCTCTAGGATTCAAACGAGTAAGCTTGGTGGACGCGTCAGGGGACCATCCCCATTAATCCATCAGTGGATAGAATTCTGTCTGCAATCTGCAAGAGCACTTCCCTTTAAGCAGGAAGTGATCCCAGGTGCCTCTCCCCCTCTTCTTCAAGGTCATTCCATCAATGTGCCCTTGGAGTTAACCAAGGGTAGGCCAAGGCTAGACACCAATCTCATTGATGGAGCACCACCACCTGGAATTTTAGAACGGTGTGAGTTTCTAGAGCCGTTATCTAATTCAGCAGTGTCAGACTACCACTGGTTGCTTGCTTCAATCCAGGAACCTAGCAATGGATTGATACACAAAATGCGTCAGTATATCTCGTCATTGGTTACTGGTGGGTTTAATTCAAAGCTGACTTGA 1653 0.4259 MAVLLQTHYALSLPSPRYSYHFSIPNPNPNSLSLLILPKHSNSQLQFSSHRTPTHRSPPSSVSVSLREPSQTSPFKLPQAFVSVSVSVALFLCCGIRACSASLPPLTTVVQQEQTIQDDNDARNHDDKENIDIDKELEASFNAWKSKTYALTVPLKVVALRGSIPPSWIKDFINSQGKRMKFNVKYHESLESIFSDLSLPFSKENHGPTSTLAADIVGIGDSWLKFAIKKAIIEPIQDVEDKEWFKSLAEKWKVYLRRNSEGEMDPEGDIWAAPYRWGCMVIAYKTNNFQKHKLAPIEDWADLWRPDLAGRISMVNSPRDVVGAVLKYMGASYNVNDINLEVNGGRDAVKHNLALLAKQVRLFDSENYLKAFGVGDVWVAVGWSSDIIPVAKRMSNVAVIVPKSGASLWADLWAIPAASRIQTSKLGGRVRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPPLLQGHSINVPLELTKGRPRLDTNLIDGAPPPGILERCEFLEPLSNSAVSDYHWLLASIQEPSNGLIHKMRQYISSLVTGGFNSKLT 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02762 550 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 81 535 - -
Tsu04g02762 550 Pfam Bacterial extracellular solute-binding protein 214 449 - -
Tsu04g02762 550 SUPERFAMILY Periplasmic binding protein-like II 155 420 - -
Tsu04g02762 550 MobiDBLite consensus disorder prediction 46 68 - -
Tsu04g02762 550 CDD PBP2_PotD_PotF_like_1 154 520 - -
Tsu04g02762 550 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 298 312 IPR001188 GO:0015846|GO:0019808|GO:0042597
Tsu04g02762 550 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 358 377 IPR001188 GO:0015846|GO:0019808|GO:0042597
Tsu04g02762 550 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 402 421 IPR001188 GO:0015846|GO:0019808|GO:0042597
Tsu04g02762 550 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 269 285 IPR001188 GO:0015846|GO:0019808|GO:0042597
Tsu04g02762 550 Gene3D - 278 427 - -
Tsu04g02762 550 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 81 535 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02762 - - gmx:100781794 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02762 04 32103298 32107001 Tsu04g02762 04 32103298 32107001 ECH