Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02732 ATGGATACCAAATTAGTGGAGGCACTGTATTGGAAAGGAGTACCAGTTTTTGACATGGGCAGCCATATGAGCACTGTAGATGTTGGCTGGGGTTCTCCAACATTTCATAAAATGGGGAGagagaaaattattttgttagaCTCGATTCTGCCTTTTGGTTTTGAAGTATTGATGTGTGATACGGACATGGTTTGGTTAAAGAACCCACTTCCATATCTTGCTCGTTATCCAGGAGCAGATATTTTAACTTCAAGTGATCAAGTTATACCAACAGTTGTTGATGACAGTTTGGAAGTTTGGCAAGAAGTTAGTGGTGCCTACAACATTGGACTTTTCCATTGGAGACCTACAGAGTCTGCCACGAATTTGGTtaagcaatggaaagaaatgCTTCTAGCTGATGACAAGATATGGGATCAAAGTGGGTTTAATGATATTCTTCACAATCAGCTAGGACCATCTGTTGATGATGACAGTGgatttgtttttgcttttgatGGAAAACTGAAGCTAGGAATTTTGCCTGCTAGTGTCTTCTGTAGTGGACATACATATTTTGTCCAGGCTATGTACCAGCAACTTAGGTTGGAGCCATATGCAGTACACGCAACATTTCAATATGGAGGCACCGAAGGAAAGCGCCACCGACTACGAGAAGCCATGTTCTTCCTTGATCCTCCAGAATACTATAATCCTCCTGGGGGTCTCTTATCATTTAAGCCATCTATTCCAAAAAGCTTGTTGCTAAGCGGGGAGCACAATGTTGACTCACACTTTACTCTTATAAATCACCAAaTGAAACAGATTAGGACAGCACTTGCAATTGCTTCCCTTCTGAACAGAACACTGGTCATGCCTCCACTATGGTGCAGGCTTGATAGGCTATGGTTTCCCCATCCTGGTGTTTTGGAGGGATCTTTGACTAGACAACCTTTTCTCTGTCCTTTAGACCATGTATTTGAGGTAAATGTCATGTTGAAAAAACTCCCAGAAGAAGAATTTGGCCCTGAAATAGGTATTAGAGAGTATTCAATGCTTGATAATCCCTCTCTGCCGTCAGAGGTGAAAAATTCATGGCTTGATGTTCAGCTCTGTAAAGAAGGAACTCAAGATTGCGATGGATCATATAATACCACTGTTGGAGGAGTACTTAAATTTCCAAAGCATAGCAATGAAGAGATGTATATGAAAGTATTCTCACCATTCAAGGATGTAAAAGTTATTAAGTTATCTTCAGTGCAAGATGCATTCACTGGTTTCACTAATAAGgaAAGGGAAGATAAATTCAGAAATCGCGTCAAGCGGTATGTCGGCATATGGTGCTGTATGCCAGATATACCTATTGGTCACATATACTATGATATGTACTGGGATGAGAAACCTGGATGGAAACCAATTCCTCCTCAATCTCCCAAGGACGATCATCCACCTTTGTGA 1437 0.3974 MDTKLVEALYWKGVPVFDMGSHMSTVDVGWGSPTFHKMGREKIILLDSILPFGFEVLMCDTDMVWLKNPLPYLARYPGADILTSSDQVIPTVVDDSLEVWQEVSGAYNIGLFHWRPTESATNLVKQWKEMLLADDKIWDQSGFNDILHNQLGPSVDDDSGFVFAFDGKLKLGILPASVFCSGHTYFVQAMYQQLRLEPYAVHATFQYGGTEGKRHRLREAMFFLDPPEYYNPPGGLLSFKPSIPKSLLLSGEHNVDSHFTLINHQMKQIRTALAIASLLNRTLVMPPLWCRLDRLWFPHPGVLEGSLTRQPFLCPLDHVFEVNVMLKKLPEEEFGPEIGIREYSMLDNPSLPSEVKNSWLDVQLCKEGTQDCDGSYNTTVGGVLKFPKHSNEEMYMKVFSPFKDVKVIKLSSVQDAFTGFTNKEREDKFRNRVKRYVGIWCCMPDIPIGHIYYDMYWDEKPGWKPIPPQSPKDDHPPL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02732 478 Pfam Nucleotide-diphospho-sugar transferase 1 217 IPR005069 -
Tsu04g02732 478 PANTHER NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE FAMILY PROTEIN 1 478 - -
Tsu04g02732 478 PANTHER ARABINOSYLTRANSFERASE XEG113 1 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02732 Tsu-Chr4 31274545 31282836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02732 K20784 - gmx:100780346 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02732 04 31274545 31282836 Tsu04g02732 04 31274545 31282836 ECH
Tsu05g01018 05 8798284 8803944 Tsu04g02732 04 31274545 31282836 PCT