Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02718 ATGGGGTTTATACAACTCTTGTATGTAGCTTCTTTGCCAGTAATCAAAGTATTACTGATTACAGCACTTGGTTTGTTTCTTGCAATTGATTACATAGATGTATTGGGAGCAGATGCAAGGAACAAAGTGAATAATCTTGTATTTTATGTGTTTAATCCGTCGATGGTTGGTAGCAATTTGGCAGAAACATTAACatctgagaatgttctttctttGTGGTTCATGCCAGTTAATGTTCTTGCCACATTCATATTAGGCTCAGCTTTAGCATGGATTGTGATAAAGATCACAAGGCCTCCAAAGCATTTGGAAGGTTTAATATTAGGTTGCTGTTCTGCAGGAAATTTAGGAAATTTGCCTATAATCATTATTCCAGCTATATGTAAAGAGAAAGGAAGTCCTTTTGGTGACCCTAAAATCTGTCATAAATATGGGATGGCTTATGTTTCACTTTCCATGGCGATTGGTGCAGTTCTACTATGGACATATGTTTACAACATTATGAGGGTTTCAATAAGTAGAGCCAAATTGATGACTTCAAGGGTGATATCAGAATCACAACAAAACAATATTGCAGTTGTAAAAGATACCCCAAATGATGCATACACCTTACTGCTTCCAAATACAGAATATGAGGAAAAGgTTTGGTTCTcagataaaattaaatgtaatttgtgGAAGATTTCAAGAAAcctcaatttcaaaaccatTTTTGCACCATCAACCATTGGAGCAATTATTGGATTTTGCATTGGTGTAATAAACCCAATACGTAAGTTAATGGTTGGCAATGATGCTCCATTGCACGTGGTTGAAGACTCTGCATCCATGTTGGGTGAAGCAGCCATCCCTACTGTCACCCTCATATTGGGTGCAAACCTCCTTAAAGGTTTGAAGGGAACAAGTACTCCAGTGTGGTCAATTGTAGGAATCATAGCTGTAAGATATATCTTTCTGCCAATATTAGGTGTTATAGTGGTCCAAGGAGCAATCAAATTAGGTTTGGTGCATGCAGATCCTTTATATCAGTTTGTCCTTCTACTTCAGTATGCACTTCCACCAGCAATGAATATAGGAACTATGGCTCAGTTGTTTGGATCTGGTGAAAGTGAATGTTCTGTTATAATGTTATGGTCCTATGCCATGGCCTCAATTGCAGTTACCCTTTGGTCAACTTTATTTATGTGGCtagttatttga 1200 0.3567 MGFIQLLYVASLPVIKVLLITALGLFLAIDYIDVLGADARNKVNNLVFYVFNPSMVGSNLAETLTSENVLSLWFMPVNVLATFILGSALAWIVIKITRPPKHLEGLILGCCSAGNLGNLPIIIIPAICKEKGSPFGDPKICHKYGMAYVSLSMAIGAVLLWTYVYNIMRVSISRAKLMTSRVISESQQNNIAVVKDTPNDAYTLLLPNTEYEEKVWFSDKIKCNLWKISRNLNFKTIFAPSTIGAIIGFCIGVINPIRKLMVGNDAPLHVVEDSASMLGEAAIPTVTLILGANLLKGLKGTSTPVWSIVGIIAVRYIFLPILGVIVVQGAIKLGLVHADPLYQFVLLLQYALPPAMNIGTMAQLFGSGESECSVIMLWSYAMASIAVTLWSTLFMWLVI 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02718 399 Pfam Membrane transport protein 12 390 IPR004776 GO:0016021|GO:0055085
Tsu04g02718 399 PANTHER - 1 398 IPR045033 GO:0080162
Tsu04g02718 399 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02718 Tsu-Chr4 30976337 30980843 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02718 K24139 - gmx:100810166 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02718 04 30976337 30980843 Tsu04g02718 04 30976337 30980843 ECH