Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02654 ATGCGATCCACTCTTACCTTCACCATCTTCCTCATCACAATCCTTCCCCATGTTATCATCGTTCAGGGACAATCATTCTCACCATTTTCTTCCGCCCTCCAAACCCTCCAGAAACAAATAGGGTACAACTTCACCAACTTAAATCTTCTTCGTCGCGCCATGACTCATGCTTCATTCTCCGAAGAGAACAACAAAGCTTTCAGCATTGTAGGTGCTACTATCATAGAATCAACGGTTTCTTTCAATTTGCTCTCAAAAGACATTGATATTTCTGCTAAAGAGTTGAACCGTAAATTATCATTAATCTCCAATGTGGACTCTTCCTGTGCTGTTGATGCAATGAATTTGGGTTTACATAAGGTCGTTCGTGTCTCGCCTAAGACGAATACTTCTTCCACTGCTGTTGTTTGTGGTGCTTTTCGATCAATCTTCGCTGCTATTGCTATTGATAAAGGTAATACGGATAGTGCTGGTAATGTTTTCTTGAATGTTCATGGTCGTGATCTAGGGGTTTACGCAGCTATGTGA 528 0.4129 MRSTLTFTIFLITILPHVIIVQGQSFSPFSSALQTLQKQIGYNFTNLNLLRRAMTHASFSEENNKAFSIVGATIIESTVSFNLLSKDIDISAKELNRKLSLISNVDSSCAVDAMNLGLHKVVRVSPKTNTSSTAVVCGAFRSIFAAIAIDKGNTDSAGNVFLNVHGRDLGVYAAM 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02654 175 ProSiteProfiles Ribonuclease III family domain profile. 33 152 IPR000999 GO:0004525|GO:0006396
Tsu04g02654 175 Pfam Ribonuclease-III-like 48 155 IPR000999 GO:0004525|GO:0006396
Tsu04g02654 175 SMART riboneu5 48 174 IPR000999 GO:0004525|GO:0006396
Tsu04g02654 175 Gene3D Ribonuclease III domain 31 169 IPR036389 GO:0004525|GO:0006396
Tsu04g02654 175 SUPERFAMILY RNase III domain-like 32 163 IPR036389 GO:0004525|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02654 - - aprc:113847954 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02654 04 29993215 29994300 Tsu04g02654 04 29993215 29994300 ECH