Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02633 atggacCAACCAATTCACAATTTACCGTATGATTCCGCCGGCGATGATGAATCGGTGGTTTCCGATTGCGAGAGCGTTACTTCAGGCGGCGATGTTTCGGAAAGATTTGTTAGGAAGACGGATGGTGGTGATGTGAATTTTATTCGTAGCAGATTCGTTTGTGGTATGAGTACGCAAGGATTGAAAGTTGAAGCAGTATCGATTCGTAGGAATTCTTGTTCAACAGTAATGGCACAAGCGAGAGTTCAATCGTTTCAGATCTTCGCACGTGCGGTTGCTAAATTGCGCCATGGGAATGCTAATGTTAAACACGCTTGGTATGGTGCTTCTAGTAAGGAAGAAATTCTTGATATTATTCAACACGGTTTCGGTCATGCTCGTTTCAATGGTTTACGTCTTTCTCCGAATGATTCTCCTCTCCAAAGTGTGAAAAACTCTGTTGTTGATAAAGACGGTTTTAGGCACTTGTTGTTGTGCCGTGTGATCCTGGGAAAGATGGAGGTTGTGCCAGAAGGTTCTGATCAATGTCGTCCGAGTTCCGAAGAGTATGATTCTGGAGTGGATgtggatagtttttcatctccCAAGGAGTACATTGTTTGGAGTAACAGGATCAATACACATGTGTTGCCTGAATATGTTTTGAGTTTCAAACTTGCTTCTAACAAAGgACATGAGAAGGTTGGAGTTGGAGGGCAACTTATGAGACCTTCTTCGCCTTGGATGCCATTCCCGGCTCTAATTTCAGTGCTTTCCAAGATGCTGCCTCCGTCTGAGATTGCTTTCATTACCAAGTTTCACAAAGAGTATAGGGATAAGAAGATTTCACGACATGAATTGATACAAAAAGTTAGAGTAGTTGCCGGAGACAAATTGCTGGTTTCTGTTATCAAAACTTTCAGAGCAAAGGTAGTTCTAATATCTTTTTGGTGA 933 0.4105 MDQPIHNLPYDSAGDDESVVSDCESVTSGGDVSERFVRKTDGGDVNFIRSRFVCGMSTQGLKVEAVSIRRNSCSTVMAQARVQSFQIFARAVAKLRHGNANVKHAWYGASSKEEILDIIQHGFGHARFNGLRLSPNDSPLQSVKNSVVDKDGFRHLLLCRVILGKMEVVPEGSDQCRPSSEEYDSGVDVDSFSSPKEYIVWSNRINTHVLPEYVLSFKLASNKGHEKVGVGGQLMRPSSPWMPFPALISVLSKMLPPSEIAFITKFHKEYRDKKISRHELIQKVRVVAGDKLLVSVIKTFRAKVVLISFW 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02633 310 Gene3D - 39 219 - -
Tsu04g02633 310 ProSiteProfiles PARP catalytic domain profile. 1 239 IPR012317 GO:0003950
Tsu04g02633 310 Pfam RCD1-SRO-TAF4 (RST) plant domain 236 301 IPR022003 -
Tsu04g02633 310 ProSiteProfiles RST domain profile. 235 306 IPR022003 -
Tsu04g02633 310 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 12 306 IPR044964 -
Tsu04g02633 310 SUPERFAMILY ADP-ribosylation 79 219 - -
Tsu04g02633 310 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 12 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02633 Tsu-Chr4 29775316 29777697 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02633 - - gmx:100784311 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02633 04 29775316 29777697 Tsu03g02234 03 24627769 24629482 PCT