Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02626 atgcaaTCGTTATCGTTAAGTAGTAGCAAGAGTTTTACGGGTTTACGACTGGTAGGTCAAGATGCGAGGAGGCTCAAGAGAAAGAGTAACAGCACCGTCGTGGTGGTGGTCGCATGTGGCAGTAAAGATACTCCACCAAGTTCAACCTCATTTCTCTCAAGGACTCAAACTTATGCTCTTTTGAAACAACAAATGGAAGTTGCTGCTAAATCTGaggattacAAGGAAGCTGCTAGAATTCGTGACTCGCTTAAGTTGTTTGAAGAGGAAGAGCCTGTTTTGCGTTTAAGGAGATTAATCAAGGAAGCAATTGCTGATCAGAGGTTCCAGGATGCAGCTAGTTATCGTGATGAGCTAAAGAAAATTGCTCCACACTCTCTTTTAAAATGTTCCAGTGATGCTACAACACAGGGAGTCAGGATTCAAGTCAGGAGTGTATATATAGAGGGCAGAAGTCAGCCTTCAAAGGGACTCTACTTTTTTGCATATAGAATAAGAATTACCAATAACTCAGAGGACACCGTTCAACTTCTTAGAAGGCATTGGATTATAACCGACGCTAATGGGAAAACAGAAAATGTATGGGGAATTGGGGTTGTTGGTGAACAACCGGTACTTCTTCCCAGGACTAGTTTCGAGTACTCTTCGGCATGCCCATTAGGCACACCAAATGGTAGAATGGAaggtgaatttgagatgatcCATGTTGATAAAGTAGGCTCACGTTCATTTAATGCTATCATTGCCCCATTTTCTCTCGCTGTTTTAGGAGATGATGACTGCAATACTATTTGA 795 0.405 MQSLSLSSSKSFTGLRLVGQDARRLKRKSNSTVVVVVACGSKDTPPSSTSFLSRTQTYALLKQQMEVAAKSEDYKEAARIRDSLKLFEEEEPVLRLRRLIKEAIADQRFQDAASYRDELKKIAPHSLLKCSSDATTQGVRIQVRSVYIEGRSQPSKGLYFFAYRIRITNNSEDTVQLLRRHWIITDANGKTENVWGIGVVGEQPVLLPRTSFEYSSACPLGTPNGRMEGEFEMIHVDKVGSRSFNAIIAPFSLAVLGDDDCNTI 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02626 264 SUPERFAMILY ApaG-like 135 255 IPR036767 -
Tsu04g02626 264 Pfam UvrB/uvrC motif 61 89 IPR001943 GO:0005515
Tsu04g02626 264 Pfam UvrB/uvrC motif 95 122 IPR001943 GO:0005515
Tsu04g02626 264 ProSiteProfiles UVR domain profile. 55 90 IPR001943 GO:0005515
Tsu04g02626 264 ProSiteProfiles UVR domain profile. 90 125 IPR001943 GO:0005515
Tsu04g02626 264 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 56 88 IPR036876 -
Tsu04g02626 264 Pfam ApaG domain 151 234 IPR007474 -
Tsu04g02626 264 ProSiteProfiles ApaG domain profile. 133 260 IPR007474 -
Tsu04g02626 264 PANTHER OS05G0170800 PROTEIN 40 260 - -
Tsu04g02626 264 Gene3D ApaG domain 129 259 IPR036767 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02626 - K06195 lja:Lj4g3v1476200.1 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02626 04 29670358 29674765 Tsu04g02626 04 29670358 29674765 ECH