Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02624 ATGGCCAACACAAACAACGCCGGCGCGGAAGCCCTACACCGTCTGAAAGAAGTTGATCCACCGTCATTGCTCGTACCCAACCCAACGCTATCAGAAACTGCACGTGCTGCATCGAAGTACCTATTCTCTTCCCTCAGACCCTTCTCCCAAAAATGTCCCTTAGACCAACTCCTCGTCGACGGTTACGATGCTGAGCAGATTTGGCATCAAATTGACCTCCAATCTCAGCCTCTCTTGTCCACTCTTCGCCGCCGGGTGAATCAGTTCGTCAAAAATCCTGATGAGATTGCGCAGCTGGTTCCTTCAGGTGTTGCAAAGAAGGTGGAGGCAAAGAAACAAGATGAGTGGGAAGAGGAaagtgatgattttgatgaggAATTGAATGATGATGACGACGACGACGATGACGAAGATGAGGATGATTTTGAAGGATTAGAAAAGAAGGAGAAAAAAGGAGGAagtgaaggagaagaagattcagaagaagaagaagtgagcGAGGAGGAAGACGAGGAGGgtgaaaaagagaaagagaaaggtaAAGGTGGTGGCATTGaagataattttttgaaaataaatgaaTTGAATGAGTATTTAGAGAAGGAGGAAAATAATTATGAGAAAGCTGAGGAGGAAGATAACGGCGATGAAGAcagtgaagaagatgatgaactCGAGGAGGCTGGTGATTTTGAGATAGATGAGGATGAGGAcgaggatgatgatgaagacgatgaggaagaagaagagggCATGGAAAATTCAAGGACTCCTTCTACCTATGAAAAGCAGCTGGAAAAAATTCAATCAGAGATAGAGCGGATGGAAAAAGCTAATGTAGAGCCAAAAACTTGGACTATGCAGGGTGAGGTAACTGCTGCAAAGAGACCCGTTGATAGTGCATTGGAAGTGGATCTTGATTTTGAGCATAATGTGAGACCTACTCCTGTAATCACTGAGGAGGTTACAGCTTCAATTGAGGAAATTATCCAGAAAAGGATTGTTGAGGGGCTTTTTAACGATGTTCAAAGGGCTCCTAGATTGCCATTGAAAGCGCCTCGGGAAGTTAAAGAATTGGATGATAATAAAAGCAAGCAGGGTCTTGCAGAAATGTATGAGcAAGAATATGTTCAGAAGATTGACCCCACATCTGCTCCATTGTCATTCAAAGATGAACTTAAAAACGAGGCAAGCATGCTGTTTAAGAGACTCTGTCTGAAGCTGGATGCCCTTTCTCATTTTAGCTTTGCTCCAAAACCTGTTATAGAGGACATGTCCTTCCAAACAAATGTACCTGCTCTGGCAATGGAAGAAATTGCTCCTGTGGCTGTTTCAGATGCTGCTATGCTGGCTCCTGAGGAGGTCTTTGATGGGAAGGGTGATGTTAAGGAAGAAGCAGAACTTACACAGGCAGAAAGGAAAAGGAGGAGAgctaataaaaaaagaaaatttaaagCGGAGGCAGTAAAAAAGTCAGAAAAAAAGGCAAGGTCGGAAAAGAAGGAAGACAATGCAATTTCTGGTCAAGTTAATGGCTAA 1539 0.3905 MANTNNAGAEALHRLKEVDPPSLLVPNPTLSETARAASKYLFSSLRPFSQKCPLDQLLVDGYDAEQIWHQIDLQSQPLLSTLRRRVNQFVKNPDEIAQLVPSGVAKKVEAKKQDEWEEESDDFDEELNDDDDDDDDEDEDDFEGLEKKEKKGGSEGEEDSEEEEVSEEEDEEGEKEKEKGKGGGIEDNFLKINELNEYLEKEENNYEKAEEEDNGDEDSEEDDELEEAGDFEIDEDEDEDDDEDDEEEEEGMENSRTPSTYEKQLEKIQSEIERMEKANVEPKTWTMQGEVTAAKRPVDSALEVDLDFEHNVRPTPVITEEVTASIEEIIQKRIVEGLFNDVQRAPRLPLKAPREVKELDDNKSKQGLAEMYEQEYVQKIDPTSAPLSFKDELKNEASMLFKRLCLKLDALSHFSFAPKPVIEDMSFQTNVPALAMEEIAPVAVSDAAMLAPEEVFDGKGDVKEEAELTQAERKRRRANKKRKFKAEAVKKSEKKARSEKKEDNAISGQVNG 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02624 512 MobiDBLite consensus disorder prediction 105 284 - -
Tsu04g02624 512 Coils Coil 158 178 - -
Tsu04g02624 512 MobiDBLite consensus disorder prediction 206 252 - -
Tsu04g02624 512 MobiDBLite consensus disorder prediction 266 280 - -
Tsu04g02624 512 PIRSF snoRNP_Mpp10 6 256 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Tsu04g02624 512 PIRSF snoRNP_Mpp10 210 510 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Tsu04g02624 512 MobiDBLite consensus disorder prediction 115 143 - -
Tsu04g02624 512 Coils Coil 461 488 - -
Tsu04g02624 512 MobiDBLite consensus disorder prediction 459 474 - -
Tsu04g02624 512 MobiDBLite consensus disorder prediction 156 173 - -
Tsu04g02624 512 Pfam Mpp10 protein 208 492 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Tsu04g02624 512 Pfam Mpp10 protein 50 218 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Tsu04g02624 512 Coils Coil 261 281 - -
Tsu04g02624 512 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 3 504 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Tsu04g02624 512 MobiDBLite consensus disorder prediction 489 504 - -
Tsu04g02624 512 MobiDBLite consensus disorder prediction 459 512 - -
Tsu04g02624 512 Coils Coil 192 219 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02624 K14559 - gmx:100781093 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02624 04 29655419 29661319 Tsu04g02624 04 29655419 29661319 ECH