Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02586 ATGGCAAGTACCATCTCACTCACAATTCTCAAACTGttgattattttcatatttgcaGCTTGGATTTCTCTTTGGCTTCTAAAGCCAACTCAAGTATGGACAAGAAAATGGAAACATGCAGAACAAAGTGCCAATAATACAATTTTCGGTTACTATGGTCTAAACTTTGCTGTGTATACATTTCCAATAATTGCTATTGCTATTATTGGACTTCTTTTCTTGGATTTGAAAGCTAAATATCAAAGAAACAGAAGTTCAAGGAGTTCATCAAAAATCTTCTCAAATCCACTAGTGGTGAATAGTTTGATTGGAATCTTATCAAGTATTGAAATACTGGTAGTTTTTCTTGTTATAGTTTTCTTGGCATGGACTTATTATGCTCGTATTTCCAATGATTTCAAAAAGTTGATGCAAGATAAATCACTGAAATTGAACTTATGGCAACTTAAGTATCTCAGAATAGCAACAAGGTTTGGTTTGCTAGCAGAAGCTTGTTTGGCTTTGcttcttcttccaattttaagAGGGTTGTCGCTATTTCGCATATTTGGTATTCAATTTGAAGCTTCAGTTAGGTATCACACATGGATTGGAACTGCAATGATACTTTTTGCTACAATACATGGTATCAGCACTTGGTTTGTTTGGGGGGTCAGCCACCATATACAACATGAGATTTGGAAGTGGCAAAAGACAGGACGTATATACCTTGCTGGGGAGATTGCACTTGTTGTTGGGCTAGTAATATTTGTTTCTTCACTTCCCCAAATTAGAAGAAGAAAGTTTGAAATTTTCTACTACACACATCATTTGTATATAGTCTTTCTAGTACTTTTCTTGTTTCATGCTGGAGATAAGCACTTCTATATGGTCTTCCCAGGAGTATTCCTTTTTATTCTTGACAAACTGCTCCGAATAATTCAATCAAGCCCAAAAACCTGCATGGTTTCAGCTAGAATTTTTCCCTGTGATGCTGTGGAGCTAATTCTGCCTAAAGATACAAGACTAAAGTATAACCCTACAAGTGTTATATATTTGAAGATACCAACTATATCTCATATTCAATGGCATTCATTCAGTATAATATCTAGTTCCAAAAGTGATGAAAACATTATGTCTGTGATGATTAAATGTCAAGGGTGGTGGACAAATACTCTTTATGACTTGATACAAACTGAACTAAACAAAGGTGCTGATAAAAGGAAGGGTATACCTGTTGCAATTGAAGGACCCTATGGTCCTGCtgcattagattttttaaaATATGACAGTGTACTTATGGTTGCTGGAGGGAGTGGAATAACTCCATTTCTGAGTATTTTGGCAGAAATCGATTCAActaccaacaaaaataaatttccttCAAGGATAGAACTTGTACATGTCATAAAGAGGGCACAAGACATTTGTCTGTTACATTCCATCGCGCATCTGCTAGTCAACCAAACAAGCgaaaaatttcatttgaaactaAAATTGTTTGTAACGCAAGAAACGCAGCCAGGCATGGGAATTACGGAGCTGTTAAATGAGTTCGTGAAAGTAAAAACCCTGCAATTGGACAGTGTGAGCTCAAATTATTATGCAGCATATGGACCTGAAAGTCCAGTTTGGATGGCTGCTATTACAGGATGCTGTTCCATCACTTTCCTTGTTTTTCTAATATGTTTCAACCATATTATAATTCCATCTGAAAAGCATTCCAAATTGTCCAAAGAAAAGACTCCATCTTGGATTGTGGATCTAGTTCTGATAGCTGCTTTTGTCCTAGCTTTATGTTGCAGCACTTTGATAGCAGTTGTGTTGAGATGGAGAAGGCTGAAGAAAGGGGTTCGGCCAACGTCGCAGACAGAAATTAAACCCTTTGATCTAAGTTCAGCTGAAACTAAGAATGCTCTTGAAGAACATGAAGTTCATTTTGGAGGAAGGCCTAACTTTAAAGATATATTAGGCAAGTTCAAGAATGAAACGAGTGGAACTGATGTTGGAGTTTTGGTTTGTGGTCCTGAGAGCATGAAGGAATCAGTGGCGACCGCGTGCCAGCAAGAATCTGAGTGTTCTAAGTTAAGTGTAAAGACAACAAAACCATGCTTCACTTTCCACTCTCTCAACTTCACACTTTAG 2124 0.3588 MASTISLTILKLLIIFIFAAWISLWLLKPTQVWTRKWKHAEQSANNTIFGYYGLNFAVYTFPIIAIAIIGLLFLDLKAKYQRNRSSRSSSKIFSNPLVVNSLIGILSSIEILVVFLVIVFLAWTYYARISNDFKKLMQDKSLKLNLWQLKYLRIATRFGLLAEACLALLLLPILRGLSLFRIFGIQFEASVRYHTWIGTAMILFATIHGISTWFVWGVSHHIQHEIWKWQKTGRIYLAGEIALVVGLVIFVSSLPQIRRRKFEIFYYTHHLYIVFLVLFLFHAGDKHFYMVFPGVFLFILDKLLRIIQSSPKTCMVSARIFPCDAVELILPKDTRLKYNPTSVIYLKIPTISHIQWHSFSIISSSKSDENIMSVMIKCQGWWTNTLYDLIQTELNKGADKRKGIPVAIEGPYGPAALDFLKYDSVLMVAGGSGITPFLSILAEIDSTTNKNKFPSRIELVHVIKRAQDICLLHSIAHLLVNQTSEKFHLKLKLFVTQETQPGMGITELLNEFVKVKTLQLDSVSSNYYAAYGPESPVWMAAITGCCSITFLVFLICFNHIIIPSEKHSKLSKEKTPSWIVDLVLIAAFVLALCCSTLIAVVLRWRRLKKGVRPTSQTEIKPFDLSSAETKNALEEHEVHFGGRPNFKDILGKFKNETSGTDVGVLVCGPESMKESVATACQQESECSKLSVKTTKPCFTFHSLNFTL 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02586 707 Pfam Ferric reductase NAD binding domain 422 681 IPR013121 GO:0016491
Tsu04g02586 707 Pfam FAD-binding domain 316 415 IPR013112 GO:0016491
Tsu04g02586 707 Gene3D - 406 542 IPR039261 -
Tsu04g02586 707 Gene3D - 602 705 IPR039261 -
Tsu04g02586 707 SFLD Ferric Reductase Domain 29 684 - -
Tsu04g02586 707 SFLD Ferric reductase subgroup (FRE) 5 684 - -
Tsu04g02586 707 PRINTS Cytochrome B-245 heavy chain signature 262 282 IPR000778 GO:0016020|GO:0016491
Tsu04g02586 707 PRINTS Cytochrome B-245 heavy chain signature 237 260 IPR000778 GO:0016020|GO:0016491
Tsu04g02586 707 Pfam Ferric reductase like transmembrane component 159 279 IPR013130 -
Tsu04g02586 707 SUPERFAMILY Riboflavin synthase domain-like 316 414 IPR017938 -
Tsu04g02586 707 PANTHER FERRIC REDUCTION OXIDASE 8, MITOCHONDRIAL 1 706 - -
Tsu04g02586 707 CDD NOX_Duox_like_FAD_NADP 316 497 - -
Tsu04g02586 707 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 406 523 IPR039261 -
Tsu04g02586 707 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 293 418 IPR017927 GO:0016491
Tsu04g02586 707 PANTHER NADPH OXIDASE 1 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02586 Tsu-Chr4 29183448 29186993 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02586 179 707 Miscellaneous Gene Families AT5G50160 48.101 4.20e-179 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02586 K00521 - gmx:100816560 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02586 04 29183448 29186993 Tsu04g02586 04 29183448 29186993 ECH