Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02535 ATGGCACCTCCTATGGCAACATTAACCACTCTCATTACCATACTTTTCTCAATAGCTTCTTCTGCAGTATCAACTGCAGAAGAATCTACAAGACCCTTCAAGAAAATTTACGCATTCGGAGACTCGTTCACAGACACCGGTAACACGAAAAACGCCGAAGGACCAAGTGGTTTTGGCCATGTATCAAACTCACCATATGGCTCATCATTCTTCAACCATTCCACAAATAGATATTCTGATGGAAGACTTGTTATTGATTTTGTAACTGAATCACTTTCTTTGCCTTATCTTCCTCCTTATAGACACATCAAAAGATATAATGATACTTTTGGTGTTAACTTTGCTGTTGGTGGTTCAACAGCTATAAATCATGAGTTTTTTGTTAGGAACAATCTTTCACTTGATATTACTCCTCAATctattcaaactcaaattttgTGGTTTAATAGGTACTTGGAGAAACAAGGATCATGTCAAGGTGTTGATTCAAAGTGTAGAGATTTTGATGATACTCTTTTTTGGTTTGGTGAAATTGGTGTTAATGATTATGCTTATACTCTTGGATCTACAGTCACAGGTGATACTATAAGGAAGCTTGCAATTTCCAGTATCTCAGGAGCTTTACAGAAATTGCTTGATAAGGGTGCTAAGTACCTAGTTGTACAGGGTGCCCCTCTAGCTGGATGTCTTCCATTAGCAATGTATTTAGCTCCTGAAGATGACAGAGATGACATAGGATGTGTGAAAAGTGCTAATGACCAAAGCATCAACCATAACCTTATGCTACAAGACAAATTACAAGAATTAAGAAAACAGTATCCACATGCTGTCATAGTTTATGCCGATTACTTGAATGCGTACCGTACCGTGATGAAGAATCCAAGCAAGTATGGATTCAAAGAAGTGTTCAGAGTCTGCTGTGGATCAGGAGAGGCTCCTTACAATTTCAGTGTGTTTGCTACTTGTGGTACACCTAATGCCACTGTTTGCAGTAGCCCTTCTCAGTATATTAATTGGGATGGTGTTCATCTTACAGAAGCTATGTATAAGGTTGTTTCTAATATGTTTTTGCAAGGAAACTTCACTCAACCtccatttgattttttgttggaaaACAAAGAGAAGAATGGCTAG 1134 0.3695 MAPPMATLTTLITILFSIASSAVSTAEESTRPFKKIYAFGDSFTDTGNTKNAEGPSGFGHVSNSPYGSSFFNHSTNRYSDGRLVIDFVTESLSLPYLPPYRHIKRYNDTFGVNFAVGGSTAINHEFFVRNNLSLDITPQSIQTQILWFNRYLEKQGSCQGVDSKCRDFDDTLFWFGEIGVNDYAYTLGSTVTGDTIRKLAISSISGALQKLLDKGAKYLVVQGAPLAGCLPLAMYLAPEDDRDDIGCVKSANDQSINHNLMLQDKLQELRKQYPHAVIVYADYLNAYRTVMKNPSKYGFKEVFRVCCGSGEAPYNFSVFATCGTPNATVCSSPSQYINWDGVHLTEAMYKVVSNMFLQGNFTQPPFDFLLENKEKNG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02535 377 CDD SGNH_plant_lipase_like 36 360 IPR035669 -
Tsu04g02535 377 SUPERFAMILY SGNH hydrolase 33 357 - -
Tsu04g02535 377 Pfam GDSL-like Lipase/Acylhydrolase 36 354 IPR001087 GO:0016788
Tsu04g02535 377 Gene3D SGNH hydrolase 22 360 IPR036514 -
Tsu04g02535 377 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 6 374 - -
Tsu04g02535 377 PANTHER LIPASE/HYDROLASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 6 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02535 Tsu-Chr4 28573699 28576028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02535 17 359 Acyl Lipid Metabolism Gene Families AT4G10950 25.490 8.98e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02535 - - lja:Lj4g3v1389220.1 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02535 04 28573699 28576028 Tsu04g02535 04 28573699 28576028 ECH