Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02529 ATGTTGCCTCCTCCTATCGTCGTTGATCTTAACGACATCAAACAAAAACTCTCCGTTCAGTTTCGCCCTTTTCAACGTTCATTTCAGTTCTGGACTCGTGCCATTGATATTTACACCGGATACAagGTTTTTCAATTGCGAGTCAATTTCGTCAAAGATGTACAAAAACAAGAAGCAATGTGGGAAAGACAGCACGAACTTGCTGCTGATAAGATTTTCTCTATGTGCTTTGATCTTGGTGGTTTCTTTCTCAAGATTGCGCAAATTATAGGGAAGCCGGATTTGGCGCCGGCTGCTTGGGTGAAAAGGCTTGTTACATTATGTGATCAAGCTCCGGCGACTTCTTTTCATACTGTTAAACTTGTTTTAGAGAATGAACTTGGATTGTCTATTGATGATGTGTTTGATAGGTTTGATGTTGTGCCTCTTGGTTCTGCTTCAATTGCTCAGGTTCATAGAGCAAGACTGAAAGGTGACAAAGGTGATGTTGTTGTCAAGGTTCAGCATCCTGGagttcaggatctgatgatgaCAGATATCCGTAACTTGCAAGCTTTTGCTTTGTACATGCAAAAAACAGATATCAAATTTGATCTATATTCAGTGACAAAGGAAATGGAAAAACAGATTGGGTATGAATTTGACTTCATGAGGGAGGCCAGTGCAATGGACAGGATTAGAAAGTTCTtgtataaaacaaacaaaaggtcTCCTGTTTTGGTGCCAAGAGTAATACGAGATATGGTTACTAGAAGGGTCCTAGTTATGGAATATATTGACGGGGTTCCAATAATGAACCTTGGTGATGAAATAGCAAAGAGAGGCATAAATCCTCATGGTAAGGTTGCAGTTGCCGCAAAGCAGAAAATTCTTCAAAGCTTGACTCTAGCATATGGTCAAATGATTTTGAAAAGTGGCTTCTTCCATGCAGATCCTCATCCAGGAAATATTCTGATTTGTAAAGGATCAGAGGTTGCCTTGCTAGACTATGGACAGGTGAAAGATCTCCCAGAGGAATTGAGGCTTGGTTATGCTAATCTCGTTCTTGCAATTGCTGATGGTGACCCACTAAGAGCTTCAGAAAGCTATAGGGAGCTTGGTATAGATACGTTAAGCAAATGTGAAAATGAGCAACAAGAATTATTTAAACTGGCACAGACAATGTTTGATACAAAATTACCTCCCGGTGTGAAAATGCTGCAACCTTTTTCAGAGGATTCTTCAATTAAAAAAGTTGCTGTTCAGGCTTTCCCAGAAGAACTGTTTTCTATACTTCGGACAGTGCACCTACTGAGGGGACTTAGCGTTGGACTTGGACTCAATTATTCTTGTGCAGAACAGTGGAGACCCATTGCTGAAGAAGCTTTGTCTCAAGCTGGCAGATTTAAAGGTAAAAAGGTTAAGCATGGAGGTATAATACGTGGTATAGTAAAATCATTATTTTGGAGAAACTAA 1455 0.3897 MLPPPIVVDLNDIKQKLSVQFRPFQRSFQFWTRAIDIYTGYKVFQLRVNFVKDVQKQEAMWERQHELAADKIFSMCFDLGGFFLKIAQIIGKPDLAPAAWVKRLVTLCDQAPATSFHTVKLVLENELGLSIDDVFDRFDVVPLGSASIAQVHRARLKGDKGDVVVKVQHPGVQDLMMTDIRNLQAFALYMQKTDIKFDLYSVTKEMEKQIGYEFDFMREASAMDRIRKFLYKTNKRSPVLVPRVIRDMVTRRVLVMEYIDGVPIMNLGDEIAKRGINPHGKVAVAAKQKILQSLTLAYGQMILKSGFFHADPHPGNILICKGSEVALLDYGQVKDLPEELRLGYANLVLAIADGDPLRASESYRELGIDTLSKCENEQQELFKLAQTMFDTKLPPGVKMLQPFSEDSSIKKVAVQAFPEELFSILRTVHLLRGLSVGLGLNYSCAEQWRPIAEEALSQAGRFKGKKVKHGGIIRGIVKSLFWRN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02529 484 Pfam ABC1 atypical kinase-like domain 107 358 IPR004147 -
Tsu04g02529 484 PANTHER ABC1 FAMILY PROTEIN 11 474 - -
Tsu04g02529 484 PANTHER - 11 474 - -
Tsu04g02529 484 ProSiteProfiles Protein kinase domain profile. 137 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02529 484 CDD ABC1_ADCK3-like 107 362 - -
Tsu04g02529 484 Gene3D Transferase(Phosphotransferase) domain 1 126 349 - -
Tsu04g02529 484 SUPERFAMILY Protein kinase-like (PK-like) 111 334 IPR011009 -
Tsu04g02529 484 SMART serkin_6 137 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02529 Tsu-Chr4 28528046 28535462 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02529 K08869 - gmx:100813009 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02529 04 28528046 28535462 Tsu04g02529 04 28528046 28535462 ECH