Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02506 ATGGCGAACACTAACTTGGAAGACGTTCCTTCTGTCGATCTCATGACCGAACTACTTCGTCGTCTCAAGTGTTCCACCAAACCTGACAAGCGTCTTATTCTCGTTGGCCCACCTGGATCTGGAAAAGGCACCCAGTCACCAATCATAAAGGATGAGTACTGCTTATGCCACTTAGCCACTGGTGATATGTTGAGAGCAGCTGTATCAGCAAAAACTCCTCTTGGTATTAAGGCGAAAGAAGCTATGGAGAAGGGAGAACTTGTTTCTGATGACTTGGTTGTTGGCATTATTGATGAAGCAATGAAGAAACCATCCTGTCAGAAAGGTTTCATTCTTGACGGTTTTCCAAGAACTGTTGTCCAAGCACAGAAGCTTGACGAGATGCTGGAAAAACAGGGTGCTAAAATTGACAAAGTGCTCAATTTTGCGATTGACGACGCAATTCTTGAGGAGCGAATTACTGGACGCTGGATACACCCATCCAGTGGCAGAACCTACCATACAAAGTTTGCTCCTCCCAAGGTTCCTGGAGTCGATGATGTTTCTGGTGAACCCCTTATCCAGCGCAAGGATGACACTGCAACTGTTCTTAAGTCAAGACTGGAGGCATTTCACAAGCAAACTGAACCGGTATGA 636 0.4575 MANTNLEDVPSVDLMTELLRRLKCSTKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVSAKTPLGIKAKEAMEKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKQGAKIDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVSGEPLIQRKDDTATVLKSRLEAFHKQTEPV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02506 211 ProSitePatterns Adenylate kinase signature. 110 121 IPR033690 -
Tsu04g02506 211 PRINTS Adenylate kinase signature 33 46 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu04g02506 211 PRINTS Adenylate kinase signature 110 126 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu04g02506 211 PRINTS Adenylate kinase signature 189 204 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu04g02506 211 PRINTS Adenylate kinase signature 206 211 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu04g02506 211 PRINTS Adenylate kinase signature 61 75 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu04g02506 211 CDD ADK 31 211 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu04g02506 211 Pfam Adenylate kinase, active site lid 156 191 IPR007862 GO:0004017
Tsu04g02506 211 PANTHER NUCLEOTIDE KINASE 7 211 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu04g02506 211 TIGRFAM adk: adenylate kinase 31 211 IPR006259 GO:0004017|GO:0005524|GO:0016776
Tsu04g02506 211 Hamap Adenylate kinase [adk]. 30 211 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu04g02506 211 Gene3D - 2 211 IPR027417 -
Tsu04g02506 211 Pfam Adenylate kinase 34 211 - -
Tsu04g02506 211 PANTHER ADENYLATE KINASE 4-LIKE 7 211 - -
Tsu04g02506 211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 211 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02506 Tsu-Chr4 28320935 28324413 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02506 K00939 - gmx:100790268 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02506 04 28320935 28324413 Tsu04g02506 04 28320935 28324413 ECH