LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu04g02500	ATGGCGGATCCGATCCCAGCGCATCATAGATCCGCCACCAACCTCTTCTCCGATCCACTCGATTCCCACCCTCTATGGTTCAAACCTGCATCATTCCTCTCCCCTGACTTCGATTCCGAATCCTATATTTCCGAACTCCGAACCTTCGTCCCCTTCGATACTCTCCGTTCAGAGCTTAACAACTATCTATCATCCCTAAATCACGAACTCATTGATCTCATCAATCGTGATTACACTGATTTCGTTAATCTTAGCACTAAGCTTGTCGATGTTGATGCCGCTGTAGTGCGGATGCGAGCACCGCTGGTTGAACTTCGGGAGAAGATCGAACAGTTTAGAGGATCTGTTGATGTTTCGCTTGTTGCTATAAAGAATGGTTTGAAGCAAAGATCTGAAGCTGCTTCTGCGAGAGAGACTTTGGAGCTTCTCCTTGATACTTTTCATGTGGTTTCTAAGGTTGAGAAACTAATAAAAGAGCTGCCTAGTGTACCCTCAGACTGGTCAAATGGAGATGTGAATTTGTCGGAGAAAAATTCATTGAGCAATGGGGTTTCTGTGCAGCCTGTTGAGAATGGGACAAGTGTTAGAGAGACACAAAGCATGCTGCTGGAAAGAATTGCCAGTGAGATGAACCGGCTAAAGTTCTATGTTACACATGCAAagGACCTGCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGCCTATTAGTAGATGCAAGCTTGGGACATTGCTTTGTTGATGGTCTAGAGCACCGGGATGCAACTGCAATATACAATTGCTTACGTGCATATGCTGCCATTGATAACACCAAGAATGCAGAAGAAACTTTTCGAGTTACTGTTGTGGCTCCATTGATACAGAAGATTATCCCACATGGGCCATCAGCTGTGGCTGCTGGATCATCTGGGGATGGGCTTGAAAATGATTATCAATTGATTAAGGAGTGCATTTATAAAGACTGCAAATTTTTATTGGATATTTCTTCAGCTGAAAATTCCGGTTTGCACGTCTTTGACTTCTTGGCCAATTCAATCCTTAGAGAGGTTCTCTTTGCTATTCAAAAGGGAAAACCAGGTGCATTTTCTCCTGGAAGACCAACAGAGTTCTTGAAAAATTACAAATCAAGCTTGGAGTTCTTGGCTTATCTAGAAGGTAACTATTGTCCTTCCAGGTCTGCTGTTGCTAAATTCCGATCCGAAGCAACCTATAGCGAGTTCATGAAGCAATGGAATCTTGGAGTATATTTTTCTTTGAGGTTTCAGGAAATAGCAGGGTCTTTAGATTCTGTGCTGACAACATCTAGTCTTGTCCCCATTCAAAGTTTAGATCCCGGTGAAGCAAATTATCAAGACTTAACACTAAAACAAAGTGTAACACTGTTGGAGAGTTTGAGGTTGTGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGTTCCGACAAGTTCCTTCGCCTATCCTTGCAGCTTCTTTCTAGATACTCAAATTGGCTGTCATCTGGACTGACTGCACGCAAAAACCATAATACAAGCACCGGCACTGGGCGCGAATGGGCTGTTTCAGCTGTCATAGATGACTTTATCTTTGTTATTCATGATATAAGATGCTTGGAGGAGCATGTTCGTGGTGATTACTTACAACATGTGGTTCAGGCGCTATCTTCATGCTCCCCCGATGTTCTTGAATCAGTAAGGCAAAGCATTTTACAAAGCGGTCAATCCTTGAAATCTTTAGAACCTTTGGTCATCAAAGCAGTGGTGGAGTCACTGGTGGAAAAATCAGTCGAGGACTTGAGACAGATGAAGGGGATAACAGCAACTTACAGGATGACTAATAAGCCTCTACCTGTTAGGCATTCACCATATGTTGCGGGAGTATTACGTCCCCTGAAGACTTTTTTGGATGGGGAAAGAACCTCTAGATATTTGGCAAGTGAAACCAAGAAAGAAATACTCCTTTGTGCTGCAACTGAGATTACTGACCGTTATTATGAATTAGCTTCCGACCTTGTTAGTGTGTCAAGAAAGACAGAGTCTTCACTTCAGAAAATTAGGCTGAGTGCTCAGAGACGGGCAGGGGCAAGTTCAGACATCGCCGATAATAATGTTTCTGACACTGACAAAATGTGTATGCAGTTGTTCCTTGATATTCAGGAGTATGCCCGTAACCTATTCGCCCTAGGGGTTGAAGCAGTTAATATTGCATCCTATCGTTCATTATGGCAGTGTGTGGCTCCAGCAGATAAGCAGAACACAATTAAATTATAA	2271	0.4276	MADPIPAHHRSATNLFSDPLDSHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELNNYLSSLNHELIDLINRDYTDFVNLSTKLVDVDAAVVRMRAPLVELREKIEQFRGSVDVSLVAIKNGLKQRSEAASARETLELLLDTFHVVSKVEKLIKELPSVPSDWSNGDVNLSEKNSLSNGVSVQPVENGTSVRETQSMLLERIASEMNRLKFYVTHAKDLPFIENMEKRIQNASLLVDASLGHCFVDGLEHRDATAIYNCLRAYAAIDNTKNAEETFRVTVVAPLIQKIIPHGPSAVAAGSSGDGLENDYQLIKECIYKDCKFLLDISSAENSGLHVFDFLANSILREVLFAIQKGKPGAFSPGRPTEFLKNYKSSLEFLAYLEGNYCPSRSAVAKFRSEATYSEFMKQWNLGVYFSLRFQEIAGSLDSVLTTSSLVPIQSLDPGEANYQDLTLKQSVTLLESLRLCWREDVLVLSCSDKFLRLSLQLLSRYSNWLSSGLTARKNHNTSTGTGREWAVSAVIDDFIFVIHDIRCLEEHVRGDYLQHVVQALSSCSPDVLESVRQSILQSGQSLKSLEPLVIKAVVESLVEKSVEDLRQMKGITATYRMTNKPLPVRHSPYVAGVLRPLKTFLDGERTSRYLASETKKEILLCAATEITDRYYELASDLVSVSRKTESSLQKIRLSAQRRAGASSDIADNNVSDTDKMCMQLFLDIQEYARNLFALGVEAVNIASYRSLWQCVAPADKQNTIKL	756

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu04g02500	756	PANTHER	CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2	8	755	IPR009316	GO:0007030\|GO:0015031\|GO:0016020
	Tsu04g02500	756	Pfam	COG complex component, COG2, C-terminal	590	718	IPR024603	-
	Tsu04g02500	756	Pfam	COG (conserved oligomeric Golgi) complex component, COG2	25	156	IPR024602	-
	Tsu04g02500	756	PANTHER	BNAA01G14200D PROTEIN	8	755	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu04g02500	K20289		-	gmx:100817096	1288.86

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu04g02500	04	28251335	28258202	Tsu04g02500	04	28251335	28258202	ECH