Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02497 ATGGCAATGACAATGGCAACCATGCAAGAGATGCCAAGGAGCCCAGAAGCAAAACTTGGGCTGCGAGTTAAAGATCTATGGGATATTCAAGAAGCACAATTAAGTCCTGATGAGAAACTTAATGCTTGTTTTGAAAATATCCCTGTTTCTGCTTTTCCTTTACCTCTTGCAACCCAAGATATTGAGATAAAATCAGATGCTACCTTAGCTGAAGCTGTGAAAATACTGGCACATCACAATATTCTGAGTGCACCTGTGGTGAATGTTGATGCACCTGAAGATGCTAGTTGGATTGATAGATACATCGGAATTGTTGAGTTTGCTGGAATTGTTGTATGGATTTTGCATCAGTCTGAACCTCCATCTCCTAGGACTCCATCCACTCCTAGGAGTCCATCCAGTGCAAGTGCTATTGCAGCCGCGGCAAACGGAaatatttttgctcttgaactcGAAGCCTTAGGCCTTGGATCCGCTGCAACAACTTCAGGAGACTTTTTTGAGGATCTCACTTCTTCTGAACTTTATAAGAATACTAAGGTTGGAGATATTTCAGGGACATTCCGATGGGCTCCGTTTCTTGCTTTGGAGAGATCGAACTCGTTTCTAACCATGCTCTTGTTGCTTTCTAAGTACAAGATGAAGAGTGTTCCTGTGGTAGATTTAGGTGCTGGTAGAATTGATAATATTATCACACAACCCGCTGTGATTCATATGTTGGCAGAATGCGTCGGACTTCAGTGGTTTGAAAGTTGGGGAACCAAGGAACTGTCTCATGTTGGTCTTCCCCTTGTGACACCAGAACAGATTATCAAGGTTTATGAGGATGAACCTGTCCTTCAAGCATTTAAAGAAATGAGGAAAAAGAGGGTTGGAGCATTGCCTGTAATCGAAAGAGGTGGCACCAAACCAGTTGGTAATATAAGCTTGCGAGATGTTCAATTCTTGCTAACTGCCCCTGAAATCTATCATGATTATAGGTATGTCACCtccaaggttttaaattgtgaaCATAATAATCCTTGA 1026 0.4074 MAMTMATMQEMPRSPEAKLGLRVKDLWDIQEAQLSPDEKLNACFENIPVSAFPLPLATQDIEIKSDATLAEAVKILAHHNILSAPVVNVDAPEDASWIDRYIGIVEFAGIVVWILHQSEPPSPRTPSTPRSPSSASAIAAAANGNIFALELEALGLGSAATTSGDFFEDLTSSELYKNTKVGDISGTFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVVDLGAGRIDNIITQPAVIHMLAECVGLQWFESWGTKELSHVGLPLVTPEQIIKVYEDEPVLQAFKEMRKKRVGALPVIERGGTKPVGNISLRDVQFLLTAPEIYHDYRYVTSKVLNCEHNNP 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02497 341 SUPERFAMILY CBS-domain pair 268 324 IPR046342 -
Tsu04g02497 341 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 10 333 - -
Tsu04g02497 341 SUPERFAMILY CBS-domain pair 33 241 IPR046342 -
Tsu04g02497 341 ProSiteProfiles CBS domain profile. 56 122 IPR000644 -
Tsu04g02497 341 Gene3D - 41 247 IPR046342 -
Tsu04g02497 341 PANTHER BNAA06G16460D PROTEIN 10 333 - -
Tsu04g02497 341 ProSiteProfiles CBS domain profile. 265 326 IPR000644 -
Tsu04g02497 341 Gene3D - 254 340 IPR046342 -
Tsu04g02497 341 Pfam CBS domain 269 313 IPR000644 -
Tsu04g02497 341 SMART cbs_1 59 115 IPR000644 -
Tsu04g02497 341 SMART cbs_1 192 241 IPR000644 -
Tsu04g02497 341 SMART cbs_1 269 318 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02497 Tsu-Chr4 28213225 28216760 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02497 - - gmx:100818156 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02497 04 28213225 28216760 Tsu04g02497 04 28213225 28216760 ECH