Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02495 ATGAACTTGCAGAAACAAAACCACGTTTGCCACAACGTGATTATTCTAGTAACAGCAACCTTATCATGGTTATTGTTGATCAACTCAAACATTGTTTTCGGATTTGCTCATGATGCTACTGGATTTGGTGAACAACCACTCTCCAAAATTGCAATTCACAAAGCAGTTGTTTCACTACATAGTTCTGCCTCAGTTATTGCCACTCCTTCTATTCTCGGAACTAAGggtGAGGATACTCAATGGGTGACCGTTGATTTAGATTTTCCTGATCCATCTGTTGATGATTGGGTTGGAGTTTTCTCTCCTGCAAATTTCAATTCATCAACCTGTCCACTTGTAAATGATCCAAAAGAGCAGATTCCGTTCATATGTTCGGCTCCAATAAAGTTCAAATTTGCGAATTACTCAAACTCACACTATACCAAGACAGGAAAAGCTTCTTTGAAGTTCCAGTTGATCAATCAACGTGCGGATTTCTCCTTTGCACTATTTTCAGGCGGGCTATCAAATCCTAAACTTGTGGCAGTTTCCAATTTCATATCATTTGCCAATCCTAAAGCGCCGTTATATCCACGCCTTGCTCAAGGGAAGTCATGGGATGAGATGACAGTCACATGGACAAGTGGATATAACATAAATGAAGCTACACCTTTTGTTGAATGGGGTTCTGAAGAAAAAATACCCGCGCAAAGCCCTGCCGGAACATTGACATTCGGTCGTAACAGCATGTGTGGTTCACCTGCACGAACTGTTGGATGGCGTGATCCTGGTTTCATACACACGGGTTTTCTCAAAAATCTGTGGCCTAATTTAGTGTATACATACCGACTAGGTCATCTTTTGTCTAATGGTTCGTACATTTGGAGCAAGAAATATTCATTCAAGTCATCGCCTTATCCTGGACAGGACTCACTGCAGCGTGTTGTCATATTTGGTGATATGGGCAAAgCTGAGCGTGATGGTTCAAATGAGTATAGTGACTATCAACCTGGGTCACTCAACACCACTGACCGACTTATCGaggatttaaaaaatatagacaTTGTTTTCCACATAGGTGATATATCATATGCAAATGGATACATCTCACAGTGGGACCAATTCACAGCTCAAGTGGAACCAATTGCATCGACAGTACCATATATGATTGGCAGTGGTAATCATGAACGTGATTGGCCCAACACAGGATCCTTTTATAACACTACAGATTCAGGCGGCGAGTGTGGTGTTTTGGCTGAGACCATGTTTTATGTTCCAGCTGAAAATAGAGCTAAGTTTTGGTACGCGGCGGATTATGGCATGTTCCGCTTCTGCATAGCTGACACTGAACACGATTGGCGAGAAGGATCTGAACAGTACAAATTCATTGAGCATTGTCTTACAACAGTAGACAGACAAAAACAACCGTGGTTGATCTTCGCTGCGCATCGTGTGCTTGGATATTCCTCTTCCTCTGGGTATGCATCGGAAGGGTCATTTGAAGAGCCCATGGGAAGGGAAAGTTTGCAGAAACTTTGGCAGAAATATAAAGTAGATATTGCATTTTATGGCCATGTCCATCAATATGAAAGGACATGCCCCATTTATCAGAATCAATGTGTGAATACAGAGAAGTCTCATTATTCAGGCATTGTGAATGGAACAATTCATGTTGTTGCTGGAGGAGCAGGAAGCCACTTGTCCGATTTCAGCCAAGTAACTCCAAAGTGGAGTCTTTACAGAGATTCTGACTTTGGGTTTGTCAAGTTAACAGCATTCAATCATTCATCCCTCCTCTTTGAATACAAGAAAAGTAGAGATGGAAACTTGTTAGTCATTCCGGCCGGTTTGGCTTCCTGTGCGACGGTTCTAGTAGCAGCAACCTTATCATGGTTGTTGTTGATAAACTCAAACATTGTTTTCGGATTTTCTCATGCTACTGGATTTGGTGAACAACCACTCTCCAAAATTGCAATTCACAAAGCAGTTGTTTCACTACATAGTTCTTCCTCAGTTACAGCCACTCCTATTCTCGGCACTAAGGCCGAGTGTGATGGTCCAAATGAGTATAGTGACTACCGACCTGGGTCACTAAACACCAGTGACCGGCTTACCGaggatttaaaaaatatagacaTTGTTTTCCACATAGGTGATATATCATATGCAAACGGATACATCTCACAGTGGGACCAATTCACAGCTCAAGTAGAACCAATTGCATCGACAGTACCATATATGATTGGCAGGTTTGTTTTATTGTCCATACCTCATAACATTGACATGATCTTTTATGACACTACAGATTCAGGCGGCGAGTGTGGTGTTTTGGCTGAGACCATGTTTTACGTTCCAGCTGAAAACAGAGCAAAGTCTTGGTACGCTCAGTATGCGACGGATTATGGAATGTTCCGCTTCTGCATAGCTGACACTGAACACGATTGGCGAGAAGGATCTGAACAGTACAAATTCATTGAGCGTGGTCTTGCAACAGTAGACAGACAAAAACAACCGTGGTTGATCTTCGCTGCGCATCGTGTGCTTGGATATTCCTCTGGCTTTTGGTATGGATTGGAGGGATCATTTGAAGAGCCCATGGGAAGGGAAAGTTTGCAGAGACTTTGGCAGAAATATAAAGTAGATATTGCATTTTATGGCCATGTCCATAACTGTGAAAGGACATGCCCCGTTTATCAGAATCAATGTGTGAATACAGAAAAGTCTCATTATTCAGGCATTGTGAATGGAACAATTCATGTCGTTGCTGGAGGGGCAGGAAGCCACTTACCAAATTTCAGCCAAGTAACTCCAAAGTGGAGTCTTTACAGAGACTATGACTTTGGCTCAGGTGTATTAAGACAATCTCCGTTTCTCgttcttttaaaaaacaaagaggATGTCTACCTTATTGAGTTTGTGATAATTGCTATAAAGTGGAGTAAAAGTTATCAGCTACATCTATTGCAAGAATGGAGCTATGCTTGTACAATTTATACTGCTGCAATAGTACAGCTCAAGTCCAACTTTGATGGTGCAGTTGTTAGTCATTGCAGCCGGAAAGATAATGTTGTGTCTCACAAGGAACATTGGCATAGTATTTGGACAATTCTCGCTCCTCCAAAGGCTAAGCATCTCTTACGGAGGATTAGCAAAGGGTGCCTTCCGACATGTATGCGTCTACAAACAAGGAATGTATCGTGTCCGCTGTCATGTCCACTTTGTAGCAACAATAATGAAGACAATTGGCATGTTTTATTTGGATGTGATACTAGCATACAAGTGCAACAATCATCAGGTTTGGAACAGAAAGTTGCAGGAATTTTCGCTATGCTAGTTTGGGTACTGTGGAGCAACATAAATAATAGAGTATGGAACGATGAGAATGAATCGGGACAGAGCTTAGGATTTAAGGCACGACAACTTTGGGAAGACTGGTATTCGATACAAAAACTGCAGCAACACAGTCCACAAGCCGAGCTGCAACAACAGGTTATCATATGGCAGAAACCGAGTTGTGGTTGGTATAAGTGCGATATTGATGCCGACTTTCACAATGAGTGTCAATTTTGA 3549 0.4136 MNLQKQNHVCHNVIILVTATLSWLLLINSNIVFGFAHDATGFGEQPLSKIAIHKAVVSLHSSASVIATPSILGTKGEDTQWVTVDLDFPDPSVDDWVGVFSPANFNSSTCPLVNDPKEQIPFICSAPIKFKFANYSNSHYTKTGKASLKFQLINQRADFSFALFSGGLSNPKLVAVSNFISFANPKAPLYPRLAQGKSWDEMTVTWTSGYNINEATPFVEWGSEEKIPAQSPAGTLTFGRNSMCGSPARTVGWRDPGFIHTGFLKNLWPNLVYTYRLGHLLSNGSYIWSKKYSFKSSPYPGQDSLQRVVIFGDMGKAERDGSNEYSDYQPGSLNTTDRLIEDLKNIDIVFHIGDISYANGYISQWDQFTAQVEPIASTVPYMIGSGNHERDWPNTGSFYNTTDSGGECGVLAETMFYVPAENRAKFWYAADYGMFRFCIADTEHDWREGSEQYKFIEHCLTTVDRQKQPWLIFAAHRVLGYSSSSGYASEGSFEEPMGRESLQKLWQKYKVDIAFYGHVHQYERTCPIYQNQCVNTEKSHYSGIVNGTIHVVAGGAGSHLSDFSQVTPKWSLYRDSDFGFVKLTAFNHSSLLFEYKKSRDGNLLVIPAGLASCATVLVAATLSWLLLINSNIVFGFSHATGFGEQPLSKIAIHKAVVSLHSSSSVTATPILGTKAECDGPNEYSDYRPGSLNTSDRLTEDLKNIDIVFHIGDISYANGYISQWDQFTAQVEPIASTVPYMIGRFVLLSIPHNIDMIFYDTTDSGGECGVLAETMFYVPAENRAKSWYAQYATDYGMFRFCIADTEHDWREGSEQYKFIERGLATVDRQKQPWLIFAAHRVLGYSSGFWYGLEGSFEEPMGRESLQRLWQKYKVDIAFYGHVHNCERTCPVYQNQCVNTEKSHYSGIVNGTIHVVAGGAGSHLPNFSQVTPKWSLYRDYDFGSGVLRQSPFLVLLKNKEDVYLIEFVIIAIKWSKSYQLHLLQEWSYACTIYTAAIVQLKSNFDGAVVSHCSRKDNVVSHKEHWHSIWTILAPPKAKHLLRRISKGCLPTCMRLQTRNVSCPLSCPLCSNNNEDNWHVLFGCDTSIQVQQSSGLEQKVAGIFAMLVWVLWSNINNRVWNDENESGQSLGFKARQLWEDWYSIQKLQQHSPQAELQQQVIIWQKPSCGWYKCDIDADFHNECQF 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02495 1182 CDD MPP_PAPs 688 946 IPR041792 -
Tsu04g02495 1182 Pfam Purple acid Phosphatase, N-terminal domain 193 295 IPR015914 GO:0003993|GO:0046872
Tsu04g02495 1182 CDD MPP_PAPs 306 601 IPR041792 -
Tsu04g02495 1182 PANTHER PURPLE ACID PHOSPHATASE-RELATED 24 603 - -
Tsu04g02495 1182 PANTHER PURPLE ACID PHOSPHATASE-RELATED 674 955 - -
Tsu04g02495 1182 PANTHER PURPLE ACID PHOSPHATASE-RELATED 624 674 - -
Tsu04g02495 1182 Gene3D - 301 608 IPR029052 -
Tsu04g02495 1182 Gene3D - 685 968 IPR029052 -
Tsu04g02495 1182 PANTHER PURPLE ACID PHOSPHATASE 24 603 - -
Tsu04g02495 1182 PANTHER PURPLE ACID PHOSPHATASE 674 955 - -
Tsu04g02495 1182 PANTHER PURPLE ACID PHOSPHATASE 624 674 - -
Tsu04g02495 1182 Pfam Fn3-like domain from Purple Acid Phosphatase 66 184 IPR040974 -
Tsu04g02495 1182 SUPERFAMILY Metallo-dependent phosphatases 306 605 IPR029052 -
Tsu04g02495 1182 SUPERFAMILY Metallo-dependent phosphatases 686 945 IPR029052 -
Tsu04g02495 1182 Pfam Iron/zinc purple acid phosphatase-like protein C 547 602 IPR025733 -
Tsu04g02495 1182 SUPERFAMILY Purple acid phosphatase, N-terminal domain 165 298 IPR008963 GO:0003993|GO:0046872
Tsu04g02495 1182 Pfam Calcineurin-like phosphoesterase 685 883 IPR004843 GO:0016787
Tsu04g02495 1182 Pfam Calcineurin-like phosphoesterase 307 522 IPR004843 GO:0016787
Tsu04g02495 1182 Pfam zinc-binding in reverse transcriptase 1019 1086 IPR026960 -
Tsu04g02495 1182 Gene3D - 187 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02495 Tsu-Chr4 28180162 28192312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02495 706 966 Miscellaneous Gene Families AT1G13900 33.448 6.75e-31 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02495 K22390 - gmx:100814531 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02495 04 28180162 28192312 Tsu04g02495 04 28180162 28192312 ECH