Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02444 ATGATTTTGATTTCATTCGTTCTAATTTATATCGTTCAATGCTCAGTTTTTCATGTTACGGATCAAAATGGAAACAAGTTAACAGATGAGAGCGTTTTAAAGTATATCGAACAGTCACTTAGTAGCATTCACAATGGAAAAACCAATCACAGAAATGGTCTCACTGCTTTGGAATTAAAGGGCACCGACCGTGTTGGTCTTCTTTCTGAGGTGTTTGCTGTATTGGCCGAGTTACAATGTGATGTGGTGGAGGCTAAAGTTTGGACTCACAATGGCCGAATTGCTTCCTTAATTTATGTTAAAGACTGCAACACTGGGACCTCTATTGAAGATTATCAGAAAATTAATAGGCTCGAAGCGCGCTTAAGATATGTTCTACAGGGAGATAGCAATGTTAGGAGTGCAACAACATCTCTATCTGATGCTGTTATACACCCTGAAAGAAGGCTCCACCAAATGATGTTTGCAGATCGGGATTATCAGAAGAATCCAATTTTCAAGTTTACTTCCGAAACACCGTTGGTGACTGTCCAAAATTGGGCAGAAAGGGGTTATTCGGTTGTTAATGTTCAGTGCAAGGATAGAGCTAAGTTATTGTTTGACGTTGTCTGCAATTTGACAGACATGGAATATGTTGTGTTCCATGCAACTATCAACACAAGGATTGACCAAGCATATCTGGAATTTTACATAAGACATAAAGATGGCACCCCAATTAGTTCAGAACCGGAGCGTCAACGTGTGATTCAATGCTTACAAGCAGCAGTGGAGAGAAGATCATGTGAGGGTGTTAGGCTAGAGTTATCCGCTGAAGACAGGCAAGGACTTCTAGCCGAAGTAATGAGAACATTCCGAGAAAACGGGTTAAATGTAACTAGGGCCGACATAACCACCACAGGCGACTTGGCTGCAAATGCTTTCTATGTAACAGATGCCATTGGATACACAGCTGACCAAAAAATCATCGAATCTGTTCGACAAAAAATCGGGTTAACCAATTTAAAAGTCAAGGAATTGCCTTTCTTAAGTCACGAGAAGGCAGACAGGGAAGACCAATCAGTTGGAGTTGGTGGGGCAGTTTTATTGTCTCTTGGTAGCCTTGTGAGAAGGAATCTATACAATTTAGGTTTGATCAAATCTTGTTCTTAA 1149 0.4056 MILISFVLIYIVQCSVFHVTDQNGNKLTDESVLKYIEQSLSSIHNGKTNHRNGLTALELKGTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRIASLIYVKDCNTGTSIEDYQKINRLEARLRYVLQGDSNVRSATTSLSDAVIHPERRLHQMMFADRDYQKNPIFKFTSETPLVTVQNWAERGYSVVNVQCKDRAKLLFDVVCNLTDMEYVVFHATINTRIDQAYLEFYIRHKDGTPISSEPERQRVIQCLQAAVERRSCEGVRLELSAEDRQGLLAEVMRTFRENGLNVTRADITTTGDLAANAFYVTDAIGYTADQKIIESVRQKIGLTNLKVKELPFLSHEKADREDQSVGVGGAVLLSLGSLVRRNLYNLGLIKSCS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02444 382 SUPERFAMILY ACT-like 52 125 IPR045865 -
Tsu04g02444 382 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 15 380 - -
Tsu04g02444 382 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 15 380 IPR040217 -
Tsu04g02444 382 SUPERFAMILY ACT-like 262 334 IPR045865 -
Tsu04g02444 382 ProSiteProfiles ACT domain profile. 265 344 IPR002912 -
Tsu04g02444 382 CDD ACT_ACR_3 185 259 - -
Tsu04g02444 382 Pfam ACT domain 56 102 IPR002912 -
Tsu04g02444 382 Pfam ACT domain 265 325 IPR002912 -
Tsu04g02444 382 ProSiteProfiles ACT domain profile. 56 137 IPR002912 -
Tsu04g02444 382 Gene3D - 263 334 - -
Tsu04g02444 382 Gene3D - 54 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02444 Tsu-Chr4 27556282 27559468 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02444 - - gmx:100794729 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02444 04 27556282 27559468 Tsu04g02444 04 27556282 27559468 ECH