Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02438 ATGGATAGGGAACCTACAAATTCTTTCCAAACTCATTTAATGGACATACATGATGAAGTTTTATCTGAAGGAGACGAAGAAGCAACGATAAAAAACGAGGAAAAGGTAGATAAGCACTTGAATAAAACAACTAGAGCTCGAGAAATGAAAAGAAACCATAGAAGTATTAACAGACAATTTTCTCTTGAGACAGGATTCTCTGTTttgaatagagaaagaaaaggtAAAGATGAGAGGAAGGTTCTGACAAGAAGTGGAACAAGCTTAGGAGGTTTTGATTCATCAAGTAAGATAGGTTTGGACGGACATAAAAGAGATTTTAGTATCTTTAAGACAAAATCTACTCTCAGTAAACAGAATTCTTTGTTGCCAAGAAAATTTGAGAAGGAGTTGGAGTCTCAGAAGATTAATGGTACTTCTGGTGTGGATGATGATTCTGTTAATGCAACTGTTCCTGCTGGTAGATATTTTGCTGCTCTTAGAGGACCAGAATTAGATGAAGTCAAGGATTATGAGGACATTCTGCTTCCCACAGATGAGCTGTGGCCCTTTCTCCTTCGGTTCCCTATCGGATGCTTTGGTATCTGTCTCGGCCTAAGCAGCCAAGCAGTTTTATGGCGTAACCTGGCAACAAGCCCTGCCACAAGGTTTCTCCACATTTCTCCagatattagttttttaatatGGGTATTGGCCTTAGCAGTGCTAATAGCTGTTTCCGTCACCTATATTCTCAAATGCGTATATTactttgaagcagtgagaagaGAGTATTTCCATCCGGTTCGTATCAACTTCTTCTTTGCCCCTTGGGTTGTCTGCATGTTTTTAGCCATCTCTGTACCATCTAGAATACACCCACAACAAACCCTTCACCCTGCCATCTGGTGCACTTTCATCGTACCTTATTTTCTCCTTGAACTCAAAATCTATGGTCAGTGGCTTTCCGGAGGCAAACGACGTCTGTCTAAGGTTGCAAATCCCTCTAACCATCTTTCTGTATCAGGTAACTTTGTTGGAGCAATTTTAGCTTCAAAAGTTGGTTGGAAGGAACCTGCCAAATTCTTTTGGGCTGTTGGCTTTGCACATTACCTAGTTGTGTTTGTTACATTGTATCAGAGGTTGCCAACAAGTGAGGCACTGCCTAAAGAGCTACATCCTGTGTACTCCATGTTTATTGCTGCTCCCTCCGCGGCATGTATTGCTTGGCAGAGTATATATGGAGAGTTTGATGGGATATCCAGAAATTGCTACTTCATCGCCTTGTTTCTCTACATTTTACTTGTCGTCCGTATCAAATTCTTCACTGGTTTCAGGTTTTCAGTGGCGTGGTGGGCTTACACCTTTCCCATGACAACCGTATCAGTGGCAACCATCAAGTATGCAGAGGCTGTCCCTGCCTTCATAAGTAGGGGGCTTGCTCTTGGGCTTGCATTTATGTCGTCAACTATGGTCTCTGTTTTGTTTGTGTCCACTCTTCTGCATGCTTTCTATTGGCGCACTTTATTCCCAAATGATCTTGCTATTGCCATAACAAAGAGGAAGCAAGGCGGGGAGAAGAAACCCTTGAAGAAGGCCTATGACATTAAGCGTTGGACAAAGAAAGCTCTGACCAAGAACTCAGAGAACAAGGATACTAGTAAGAATAATGGCTGCAACAGCCCGGGCGATAATACTGCCATAGCCTAG 1689 0.4115 MDREPTNSFQTHLMDIHDEVLSEGDEEATIKNEEKVDKHLNKTTRAREMKRNHRSINRQFSLETGFSVLNRERKGKDERKVLTRSGTSLGGFDSSSKIGLDGHKRDFSIFKTKSTLSKQNSLLPRKFEKELESQKINGTSGVDDDSVNATVPAGRYFAALRGPELDEVKDYEDILLPTDELWPFLLRFPIGCFGICLGLSSQAVLWRNLATSPATRFLHISPDISFLIWVLALAVLIAVSVTYILKCVYYFEAVRREYFHPVRINFFFAPWVVCMFLAISVPSRIHPQQTLHPAIWCTFIVPYFLLELKIYGQWLSGGKRRLSKVANPSNHLSVSGNFVGAILASKVGWKEPAKFFWAVGFAHYLVVFVTLYQRLPTSEALPKELHPVYSMFIAAPSAACIAWQSIYGEFDGISRNCYFIALFLYILLVVRIKFFTGFRFSVAWWAYTFPMTTVSVATIKYAEAVPAFISRGLALGLAFMSSTMVSVLFVSTLLHAFYWRTLFPNDLAIAITKRKQGGEKKPLKKAYDIKRWTKKALTKNSENKDTSKNNGCNSPGDNTAIA 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02438 562 PANTHER - 1 539 IPR030183 GO:0006873|GO:0008308|GO:0016021
Tsu04g02438 562 MobiDBLite consensus disorder prediction 543 562 - -
Tsu04g02438 562 Pfam Voltage-dependent anion channel 188 493 IPR004695 GO:0016021|GO:0055085
Tsu04g02438 562 MobiDBLite consensus disorder prediction 538 562 - -
Tsu04g02438 562 CDD TDT_SLAC1_like 187 492 - -
Tsu04g02438 562 Gene3D - 184 503 IPR038665 -
Tsu04g02438 562 PANTHER GUARD CELL S-TYPE ANION CHANNEL SLAC1 1 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02438 Tsu-Chr4 27481060 27483284 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02438 - - zju:107434623 827.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02438 04 27481060 27483284 Tsu04g02438 04 27481060 27483284 ECH