Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02426 ATGGCTTCATTTGGAGCtttcttcatctttctcatcaacATTTTCTTCCTTCTCACACTCTCTTCAGCAGAAGATGCATTAATTCCCTATGAATTTGAGGTTTCTTACATCACTGCCTCTCCTCTTGGAGTACCCCAACAgGTTATTGCTATCAATGGTGAGTTTCCAGGTCCTACTATTAATGTAACCACAAACAACAATGTTGCTGTTAATGTCAGAAACAAATTGGATGAGAATCTTCTCATTCATTGGTCTGGTGTTCAGCAAAGGAGGACTTCATGGCAAGATGGTGTTCTTGGAACAAATTGTCCTATTCCTCCAAAATGGAACTGGACTTATAATTTTCAAGTGAAGGATCAGATTGGAAGTTTTTTCTACTTTCCTTCACTTAATTTTCAAAGAGCAGCTGGTGGATTTGGTGGTTTTATCATAAACAACCGACCTGTCATTTCTGTTCCTTTTGATACTCCACATGGAGACATTGTTGTTTTTATTGGTGATTGGTATACGCGTAATCACACGGATTTGAGAAAGGATCTTGATGATGGAAAGGATCTTGGCATGCCAAATGGAGTTCTCATCAATGGGAAAGGACCTTATAGATATAATGATACACTTGTTCCTGATGGCATTGATTTTGAACAAATTGATGTTCAACCTGGAAAAACTTACCGACTTCGTGTACATAATGTTGGAATATCAACAAGTCTGAATTTCAGGATTCAGAACCATAACTTACTTCTAGCAGAAACTGAGGGGTCATATACAGTGCAACAGAACTACACTAGCTTAGATATTCATGTTGGACAATCTTATTCTTTTCTGATAACCATGGATCAGAATGCAAGTTCAGATTACTACATTGTAGCAAGTGCCAGGTTTGTGAATGAATCACGTTGGCAGAGAGTTACCGGAGTTGGTATCTTGCACTATACAAATTCCAAGGGGAAAGCAAAAGGTCATTTACCACCGGGTCCAGATGATCAATTTGACAAAACTTTCTCAATGAACCAAGCACGATCCATCAGATGGAACGTATCAGCAAGTGGTGCTCGTCCAAATCCACAAGGATCTTTCAGATACGGTTCAATCAATGTGACAGAGAtttatgtattaaaaaataagcCACTATTGAAAATTGGTGGGAAGAGGCGAGCAACACTTAGTGGAATTTCTTATACAAATCCTGCCACTCCACTCAGACTTGCTGACAAATACAAAGTAAAGAATGTATACAAGCTTGATTTTCCCACAAAGCCTCTAACCGGACCTCCTCGGGTAGAAACATCAGTAATCAATGGAAGTTTTAGAGGATTTATGGAAATCATACTGCAGAACAATGACACCAAGATGCATACCTATCACTTGAATGGATATGCATTTTTTGTAGTAGGGATGGACTTTGGTGATTGGTCCGAGAACAGCAGGGGCACATATAACAAGTGGGATGGAATAGCTCGTACTACAGCACAGGTTTATTCTGGTGCATGGACAGCAGTTTTGGTCTCCCTCGACAACGTTGGAATTTGGAATCTAAGAACTGAAAACCTTGATTCATGGTATCTTGGTCAAGAAACATACATCAGGGTTGTCAACCCAGAGCCTACAAACAAGACGGAGCTTCCAATGCCAGATAATGCTCTTTTCTGCGGCGCACTTCAAAAAATGCAAAAGCCTCAAAAAATTACCTCGGACGCTTCAATCAATGGAAACGGGCTGAAACTGTTATTCACTCTGGTGATGTTTGTTTGTGCCATAACCAACATTTTTAAGTAA 1776 0.3902 MASFGAFFIFLINIFFLLTLSSAEDALIPYEFEVSYITASPLGVPQQVIAINGEFPGPTINVTTNNNVAVNVRNKLDENLLIHWSGVQQRRTSWQDGVLGTNCPIPPKWNWTYNFQVKDQIGSFFYFPSLNFQRAAGGFGGFIINNRPVISVPFDTPHGDIVVFIGDWYTRNHTDLRKDLDDGKDLGMPNGVLINGKGPYRYNDTLVPDGIDFEQIDVQPGKTYRLRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLITMDQNASSDYYIVASARFVNESRWQRVTGVGILHYTNSKGKAKGHLPPGPDDQFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEIYVLKNKPLLKIGGKRRATLSGISYTNPATPLRLADKYKVKNVYKLDFPTKPLTGPPRVETSVINGSFRGFMEIILQNNDTKMHTYHLNGYAFFVVGMDFGDWSENSRGTYNKWDGIARTTAQVYSGAWTAVLVSLDNVGIWNLRTENLDSWYLGQETYIRVVNPEPTNKTELPMPDNALFCGALQKMQKPQKITSDASINGNGLKLLFTLVMFVCAITNIFK 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02426 591 Gene3D - 364 563 IPR008972 -
Tsu04g02426 591 SUPERFAMILY Cupredoxins 156 353 IPR008972 -
Tsu04g02426 591 PANTHER MULTI-COPPER OXIDASE 13 562 IPR045087 -
Tsu04g02426 591 SUPERFAMILY Cupredoxins 23 174 IPR008972 -
Tsu04g02426 591 Pfam Multicopper oxidase 161 313 IPR001117 -
Tsu04g02426 591 SUPERFAMILY Cupredoxins 379 551 IPR008972 -
Tsu04g02426 591 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Tsu04g02426 591 PANTHER MONOCOPPER OXIDASE-LIKE PROTEIN SKS1 13 562 - -
Tsu04g02426 591 Pfam Multicopper oxidase 403 533 IPR011706 GO:0005507|GO:0016491
Tsu04g02426 591 Gene3D - 158 351 IPR008972 -
Tsu04g02426 591 Gene3D - 19 146 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02426 Tsu-Chr4 27311947 27316243 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02426 - - gmx:100788318 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02426 04 27311947 27316243 Tsu04g02426 04 27311947 27316243 ECH