Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02398 ATGGCTTCCAAGGCTGCTATTATTCTTGCCCTCAATCTCCTCTTTTTCACTATGGTGACCTCCAATTATGTTCCATGTCCTCCACCACCCCCAAAAGGTCACGGCCACGGCCACGGCCACTCATATCCAGTTCCTTCCTCAAATTACCCAACATGTCCTAGAGACACAATTAAACTTGGTGTGTGTGCTGATGTATTAGGTTTGATTAATGTTCAACTTGGTAAGCCACCAAAGACACCATGTTGTTCACTTCTTGATGGTCTTGCTAACCTTGAAGCTGCTGTGTGTCTTTGCACTGCTCTTAAGGCTAATGTCTTAGGCATTAACCTTAATCTTCCAATTAATTTGAGCTTGGTACTTAACTATTGTGGAAAGGGAGTTCCAAAGGGGTTCGTTTGCGCTTAA 405 0.437 MASKAAIILALNLLFFTMVTSNYVPCPPPPPKGHGHGHGHSYPVPSSNYPTCPRDTIKLGVCADVLGLINVQLGKPPKTPCCSLLDGLANLEAAVCLCTALKANVLGINLNLPINLSLVLNYCGKGVPKGFVCA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02398 134 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 2 134 - -
Tsu04g02398 134 Gene3D - 50 134 IPR036312 -
Tsu04g02398 134 PANTHER - 2 134 - -
Tsu04g02398 134 SMART aai_6 52 133 IPR016140 -
Tsu04g02398 134 CDD HPS_like 50 133 IPR027923 -
Tsu04g02398 134 Pfam Hydrophobic seed protein 51 134 IPR027923 -
Tsu04g02398 134 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 54 133 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02398 Tsu-Chr4 26921704 26927525 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02398 41 133 Acyl Lipid Metabolism Gene Families AT4G22490 38.947 4.75e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02398 - - gmx:100500229 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02398 04 26921704 26927525 Tsu04g02398 04 26921704 26927525 ECH