Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02386 ATGCTAAATTGTATCTTGATGTGTCTGAAGGTGATTGTGGAGAAAGCAGAAAGAAGTGATATCCCAAGTATTGACAAAAAGAAGTACCTTGTCCCTGCTGATCTCACAGTTGGACAGTTTGTCTATGTTATCCGTAAAAGAATTAAACTAAGTGCAGAAAAGGCGATCTTTATATTTGTGGACAATGTCCTTCCACCTACAGGAGCCATAATGTCGGCCATATATGATGAGAAGAAGGATGAAGATGGGTTTCTTTATGTTACTTACAGTGGGGAGAACACCTTTGGGGATCTTATTTCCAGTAGCAGTTCATAG 315 0.3937 MLNCILMCLKVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFGDLISSSSS 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02386 104 PANTHER AUTOPHAGY-RELATED PROTEIN 11 96 - -
Tsu04g02386 104 Gene3D - 4 96 - -
Tsu04g02386 104 SUPERFAMILY Ubiquitin-like 9 96 IPR029071 -
Tsu04g02386 104 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 11 96 IPR004241 -
Tsu04g02386 104 Pfam Autophagy protein Atg8 ubiquitin like 10 96 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02386 Tsu-Chr4 26727789 26730945 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02386 K08341 - gmx:100818315 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02386 04 26727789 26730945 Tsu04g02386 04 26727789 26730945 ECH