Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02378 ATGTCATTATTGCAGGTGAGCGAGATATTAGATTCAGAGTTATTGGGTGAGGGGCTTATACCAACCCTACAACACGCGCATGACAATTTGTTGGTGGAAAATCCTCTAACCGTACCATATCGAGCAACTACATATGGACAGCTAGTTGAAAGTACTTTCTTATGGCGATTGCATGATTTGCATAGCAATGAGGCTGGTGCATCTGATGGCATTCGACTTGCCCCTCATGGACTTGAAAGTGTTTTAGGTGTTAAACGTCAGCAATATGCCATGCATTGTGATCCCATAGGAGAAGAACTGAAACCGCTTTCAGAACCCTTCaaaatttttgaatttgatttttggaaACGGCCAGAGAGTTATGGAGAAACTGAGCTGTGCATAAAGGCAACTGATGATGGCAGAGTTAACGCAATTGTCTCTTGGTGGGTACTTCAACTTGATCGTGAAGGGACAATTTATTATTCCACTGCTCCTAGGTGGATAAAATCACCAACAATTACAAGTCCTGTTGATTGGTGTGACCACTGGAAACAGTGCGTTTGGTTTATTCCAGGGAGTGGTATATCAATATTCAAAGGGGGAGAAATTAATTTGCATGCTATTCATGATGATATTAGTATCtcatataatttaaatacaCGTGTGTCAACAACTGAGGTTTCGCATGATGGTACTATTGGAGATTTTCAGCTTTCACTTCCTCCAGAAAGAGCTGCAATCTATGGAGACGAAGGATGGAGGCTTTCGATGTTGAAAGCAGTAAAAAGTGTGTTGCAGGGAAGAGGTAACTTATTATGCTTGGTTGCAGATGATAGTGTGTATTTGCCTCTTCTTGTTGCAAAGCTTTCAAAAGCACCATATGTAATATCTTTTTCGAGACTAAAGGAAAAGGGCCTCCAATATTTGCAAGCTGCTGTCCGTGCAAATAACCTGTCACCTGATTGCATAAAAACTGTTGAAAAAGGGGTGAAACAGTTAACTATGCATGATACAAACCAGAAAAAGGTTGACCTGTTAATAGCAGAACCTTTCTATTTTGGACATGATGGCATGCTTCCATGGCAGAACCTGCGGTTTTGGAAGGATCGTACAACACTTGATCATATCCTCTCTGAAGATGCTATAATAATTCCCAGTAAAGGAATTTTGAGGGCTTGTGCCATCTATCTTCCTGATCTTTGGAAAAGTCGTTCCTGCTTGAGTAAGATAGAAGGTTTCGACCATTCTGGGGTAAACGCTACATTGGGAGCTTGCGGTCATCTACCTGAATTGGAAGAGGGTCCTTGTTTGCCTTTTTCTCTTTGGCAGTGTGGAGAGTTTGATGTGCTTAGTGAGACATTTGATGTCATGGAGTTTGATTTCACGAAACAAATATGCCAATGTGAAGGAAAATCCCAGGTTAAATTCACAAAGACAGGAGTATGTCATGGGTTTGTGCTGTGGATTGACTGGGTGATGGATTCGCAAAATTCCGTTGTGATGTCAACTGGTCCAGATAAGAGATATTGGAAACAGGGAATAAAGCTTCTTGCAACACCAAGAACTGTAGGACCCCAAGGATCAACAAATGTCCAAGCATGTTGTTCTGCAGATCTTGAAGCATCTTTTAATCCATCAAATGGGGAACTCAAAATTATACATGATTTCTTATGA 1656 0.404 MSLLQVSEILDSELLGEGLIPTLQHAHDNLLVENPLTVPYRATTYGQLVESTFLWRLHDLHSNEAGASDGIRLAPHGLESVLGVKRQQYAMHCDPIGEELKPLSEPFKIFEFDFWKRPESYGETELCIKATDDGRVNAIVSWWVLQLDREGTIYYSTAPRWIKSPTITSPVDWCDHWKQCVWFIPGSGISIFKGGEINLHAIHDDISISYNLNTRVSTTEVSHDGTIGDFQLSLPPERAAIYGDEGWRLSMLKAVKSVLQGRGNLLCLVADDSVYLPLLVAKLSKAPYVISFSRLKEKGLQYLQAAVRANNLSPDCIKTVEKGVKQLTMHDTNQKKVDLLIAEPFYFGHDGMLPWQNLRFWKDRTTLDHILSEDAIIIPSKGILRACAIYLPDLWKSRSCLSKIEGFDHSGVNATLGACGHLPELEEGPCLPFSLWQCGEFDVLSETFDVMEFDFTKQICQCEGKSQVKFTKTGVCHGFVLWIDWVMDSQNSVVMSTGPDKRYWKQGIKLLATPRTVGPQGSTNVQACCSADLEASFNPSNGELKIIHDFL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02378 551 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 201 IPR029063 -
Tsu04g02378 551 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 300 528 IPR029063 -
Tsu04g02378 551 Gene3D - 41 225 - -
Tsu04g02378 551 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 6 492 IPR025799 GO:0016274|GO:0018216
Tsu04g02378 551 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 1 209 IPR025799 GO:0016274|GO:0018216
Tsu04g02378 551 Gene3D Vaccinia Virus protein VP39 3 40 IPR029063 -
Tsu04g02378 551 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 214 551 IPR025799 GO:0016274|GO:0018216
Tsu04g02378 551 Gene3D Vaccinia Virus protein VP39 232 379 IPR029063 -
Tsu04g02378 551 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 7 6 492 - -
Tsu04g02378 551 Gene3D - 383 550 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02378 K11438 - gmx:100785846 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02378 04 26610160 26613866 Tsu04g02378 04 26610160 26613866 ECH