Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02284 ATGTTTGTTTTATTGCAGAATCAGCAGAAGGAGCAATCCGAACAAGGTTCTAGAGTTTCCAACAGACCTCACAACTACaagAAGGAGGAAGCAGAACCATGGCAAGACAATAGTAACCGTCACAGTCCTCGGCCTCATAAGGAACAATATCGTCCTCAGCAGCAGGATTACGAATCTGAATCTTTCAATACTTCCAACAGACCCAACAAGtCAAATGAAGATAACAACGAAGGATGGCAGACTGTGGGAAAACCTTCAAGACAGACACAcaagGTTCCAAAGGATAACTGGAACAGCTATAAACTTCCTGCTGATGAGCAACAATACTCCAATGAAGTTGAAGTTGGTGCTAGAGTGGAGCCATCACAAGACGAACTTGCTGATCTGTCACGGGCTTGTGAAAAACTCTGGGATCTGGATTTAAACCGTTTGGTACCTGGCAAGGACTATGAAATTGATTGTGGTGAAGGGAAAAAAGTTTACCAAAAGGAAGATATGGCACAGGGGAGCTTGTTTACATGGGTTAGCGATGATGTATTCAGAAAGCCCACTTATGCTCGATTTCTTTCGCTGTTAGATAATTACAACCCACATCAAGGATCTAAGGAGGTTGTGACATCTGAAGAGAAACAAGAGCAAGCTTCCTTCATAGAAGAAATTAGTAGAACAGCACCGATTAAATATCTTCACAAGTTTCTTGCATCCAAAGGAATCACGTCAGGGAGTTTACAAGATTTCAAAAGATTGTTGACTAGTTTGTGGTTTGACCTTTATAGCCGTTGTGGGACTTCTGGTTCCTCTTCTGCTTGTGAACATGTATTTGTTGgagaaatcaaacaaaacagTGAAGTTTCTGGATTTCATAACTGGCTGCAGTTTTACCTCGAAGAAGTAAAGGGAAATATTGATTATCAAGGCTATATTTTTCCCCGTCGACGGGGTTCAACTGCTGACTCTGAAACCCAGCTCCTGACCATTCAGTTTGAATGGAATGGTGTTCTGAAATCGGTATCAAGCACTTTGGTTGGAGTGAGCCCTGAATTTGAAATTGCTTTGTATACCCTGTGTTTCTTTATCGGTCAGGAAGATAACCACATTCAGATTGGTCCATATGCAGTTAATATCAAGTGTTATCGTTTAGGCAATCAAATTGGATCGGTTTTCCCAATTGCAGATTCATGA 1182 0.4052 MFVLLQNQQKEQSEQGSRVSNRPHNYKKEEAEPWQDNSNRHSPRPHKEQYRPQQQDYESESFNTSNRPNKSNEDNNEGWQTVGKPSRQTHKVPKDNWNSYKLPADEQQYSNEVEVGARVEPSQDELADLSRACEKLWDLDLNRLVPGKDYEIDCGEGKKVYQKEDMAQGSLFTWVSDDVFRKPTYARFLSLLDNYNPHQGSKEVVTSEEKQEQASFIEEISRTAPIKYLHKFLASKGITSGSLQDFKRLLTSLWFDLYSRCGTSGSSSACEHVFVGEIKQNSEVSGFHNWLQFYLEEVKGNIDYQGYIFPRRRGSTADSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFFIGQEDNHIQIGPYAVNIKCYRLGNQIGSVFPIADS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02284 393 MobiDBLite consensus disorder prediction 1 104 - -
Tsu04g02284 393 MobiDBLite consensus disorder prediction 1 20 - -
Tsu04g02284 393 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 125 393 IPR018998 GO:0004521
Tsu04g02284 393 PANTHER PLACENTAL PROTEIN 11-RELATED 44 392 IPR039787 GO:0004521
Tsu04g02284 393 PANTHER - 44 392 - -
Tsu04g02284 393 Pfam Endoribonuclease XendoU 128 389 IPR018998 GO:0004521
Tsu04g02284 393 MobiDBLite consensus disorder prediction 55 104 - -
Tsu04g02284 393 CDD XendoU 125 389 IPR018998 GO:0004521
Tsu04g02284 393 SUPERFAMILY EndoU-like 127 391 IPR037227 -
Tsu04g02284 393 MobiDBLite consensus disorder prediction 21 54 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02284 K14648 - gmx:100813919 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02284 04 25511882 25516614 Tsu04g02284 04 25511882 25516614 ECH