Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02280 atgtaTTCATCAACACTAAAACAACCTTGTTACATAGAACAAGACAACGGTTTAGCTTCCTTAAAAGACATAGATATTGTTGGTCACCGTGCTAATAACTTTGTTACAAAATCTATGATAACTATGGGTTATTCCAATAGAACTAGCTTCAAcaatctttcttttttgtcttcACCTGGATCTCGAACTAGTGGAAGATTCTATGATGCTAGATTTGAAGATCATCAACCTCACTTTCTTGAAGCTTGTTCTCTTTGTAACAAATCACTTGGTGACAATAAAGACATCTTCATGTATagGGGTGACACACCTTTTTGTAGTGAAGAGTGTAGACAAGAACAAATAGAGATTGATGAATTGAAAGAGAAGAATATGAATCTTTCTTCATCTATGAAGGCTTTGAGGATTAAGGACCAAAGAAAATCTAATTCAACAAACAAGGTTCAAGGCCATGATTATTCCTTTCGGACAGGGACTGTTATTGCAGCATAG 492 0.3333 MYSSTLKQPCYIEQDNGLASLKDIDIVGHRANNFVTKSMITMGYSNRTSFNNLSFLSSPGSRTSGRFYDARFEDHQPHFLEACSLCNKSLGDNKDIFMYRGDTPFCSEECRQEQIEIDELKEKNMNLSSSMKALRIKDQRKSNSTNKVQGHDYSFRTGTVIAA 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02280 163 Pfam zinc-finger of the FCS-type, C2-C2 70 120 IPR007650 -
Tsu04g02280 163 PANTHER - 49 163 - -
Tsu04g02280 163 Coils Coil 110 137 - -
Tsu04g02280 163 ProSiteProfiles Zinc finger FLZ-type profile. 78 122 IPR007650 -
Tsu04g02280 163 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 49 163 IPR044533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02280 Tsu-Chr4 25434577 25435803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02280 - - aprc:113849917 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02280 04 25434577 25435803 Tsu04g02280 04 25434577 25435803 ECH