Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02268 ATGGGTTCTAAGAATGCCGCACCGGGCAGCAGAGCACGGAGGCCTTTGTCGATTTTTGCTGTGCTTGCTCTGTgctgtttgttttatcttttggGAGCATGGCAAAGAAGTGGTTACGGAAAGGGAGACAGCCTTGCCTTAAAGGTAAATAAGATACAGGCAGACTGCAACATTGTACCGACTTTGAATTTTGAACCCCATCACAAATATGTAGAAAATGTTGAACCGTCCGAACCAAAAGCTAAAATGTTCAAGGCGTGTGATGTAAAATATGCTGATTATACACCTTGCCATGAACAAGACCGAGCAATGAAATTCCCGAGAGAAAACATGATCTATAGGGAGAGACATTGTCCAcctgaaaatgaaaaattgcattgCCTCATTCCTGCACCCGAGGGATACACATCTCCATTTCCTTGGCCTAAAAGCCGTGATTATGCCTATTATGCTAATGTTCCTTACAAGCATTTGACAGTGGAGAAGGCTGTTCAACACTGGGTCGAATTCCAGGGAAATGTGTTCAAATTTCCAGGTGGAGGAACCATGTTCCCTCAAGGAGCAGATGCATATATTGATGAACTTGCATCGGTTATTCCAATAGCAGATGGTACAGTCAGAACAGCGTTGGACACTGGTTGCGGAGTTGCAAGCTGGGGAGCATACTTGCTAAAGAGAAATGTGATAGCCATGTCTTTTGCTCCAAAGGATAACCATGAAGCACAAGTTCAGTTTGCACTGGAACGAGGGGTACCTGCTATAATTGGGGTTCTTGGTTCAATCCGTCTTCCATTCCCATCAAGATCTTTTGATATGGCTCAGTGTTCTCGATGTCTAATACAATGGGCTTCCAATGAGGGCATGTATCTAATGGAAGTTGACCGAGTTTTAAGGCCTGGTGGATATTGGATTTTGTCCGGCCCTCCAATTAATTGGAAAACATACTACCAAACATGGAAGCGGTCCAAGGAGGATGTGAAGGCAGAGCAGAAAAGAATTGAGGATTTAGCTGAAAGTCTTTGCTGGGAAAAGAAGTATGAAAAGGGTGATATCGCTATCTGGAGGAAGAAAATAAATGCTAAATCCTGTCAAAGAAAGTCTCCCGCTTTATGTGATTCAGAAAATGCTGATGATGTATGGTACAAAAATATGGAGGCATGCAAAACCCCGATCCCTGAGgtaacaagccaaaatgaagTTGCTGGAGGTGAACTGAAGAAATTTCCTGCAAGGCTTTTTGCAATTCCTCCTCGAATAGCCAATGGAGTTATTCCAGGTGTAACAGTTGAATCCTATCAAGAGGACAACAAATTATGGAAAAAACGTGTTACTAATTACAAAAGAATTAATAGATTGATCGGCACCACTAGATATCGGAATTTGATGGACATGAATGCGGGCCTTGGAGGATTTGCAGCGGCACTTGAATCACAAAAATCTTGGGTGATGAATGTTGTGCCAACAATTGCTGACAACACTTTAGGTGTTATCTATGAAAGAGGTCTCATTGGTATTTATCATGACTGgTGTGAAGGCTTTTCTACATATCCAAGGACATATGATCTTATTCATGCTAGTGGTTTATTCAGTTTGTACCAGGACAAGTGCAACCTAGAAGACATCCTTTTAGAAATGGATCGCATACTAAGGCCCGAAGGATCGGTCATAATACGCGATGAAGTTGATGTCCTTAACAAGGTTAATAAAATTGTTAGGGGAATGAGATGGGAAGCTAAAATGATGGATCATGAGGACGGCCCGCTTGTACCCGAGAAGATATTGGTTATTATGAAAGAGTATTGGGTTGGCCACAGTAAAAACAACACATCCAGCTAG 1836 0.4101 MGSKNAAPGSRARRPLSIFAVLALCCLFYLLGAWQRSGYGKGDSLALKVNKIQADCNIVPTLNFEPHHKYVENVEPSEPKAKMFKACDVKYADYTPCHEQDRAMKFPRENMIYRERHCPPENEKLHCLIPAPEGYTSPFPWPKSRDYAYYANVPYKHLTVEKAVQHWVEFQGNVFKFPGGGTMFPQGADAYIDELASVIPIADGTVRTALDTGCGVASWGAYLLKRNVIAMSFAPKDNHEAQVQFALERGVPAIIGVLGSIRLPFPSRSFDMAQCSRCLIQWASNEGMYLMEVDRVLRPGGYWILSGPPINWKTYYQTWKRSKEDVKAEQKRIEDLAESLCWEKKYEKGDIAIWRKKINAKSCQRKSPALCDSENADDVWYKNMEACKTPIPEVTSQNEVAGGELKKFPARLFAIPPRIANGVIPGVTVESYQEDNKLWKKRVTNYKRINRLIGTTRYRNLMDMNAGLGGFAAALESQKSWVMNVVPTIADNTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHASGLFSLYQDKCNLEDILLEMDRILRPEGSVIIRDEVDVLNKVNKIVRGMRWEAKMMDHEDGPLVPEKILVIMKEYWVGHSKNNTSS 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02268 611 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 445 594 IPR029063 -
Tsu04g02268 611 PANTHER METHYLTRANSFERASE PMT14-RELATED 5 605 - -
Tsu04g02268 611 Gene3D Vaccinia Virus protein VP39 159 366 IPR029063 -
Tsu04g02268 611 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 605 IPR004159 GO:0008168
Tsu04g02268 611 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 93 598 IPR004159 GO:0008168
Tsu04g02268 611 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 321 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02268 Tsu-Chr4 25295627 25300323 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02268 - - mtr:MTR_4g098890 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02268 04 25295627 25300323 Tsu04g02268 04 25295627 25300323 ECH