Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02254 ATGGCAGACATTGTGGAGGAAGATCAATCGGAGAAGAAGGTCGAGATCATCCTCAAAACAATCGGTCCAACTCCAACCTCTCGTCTTCGAGTTTCATCTTTCATCAAGGTGCGTGATTTGAGAAGATTAATTGCAAGTGATGGTCATTTACCCATTGACAACTTGAGTCTTATTCTACGTGGAACTGCATTATGTGACATAAAAAACGGAGACGATGTGCATATACAACTCAATGATGGAGATTCCTTGATTGTTGCTGTCAAACCAAAGCCACCAATGAAGGATGGGCATGACAACGATGATGACGATGAAGATTTgAAGTTTCAGCTTCCTCACTCATCAAGTCGGTGGAAAAAGAGGCTATACTCTTTTCTACATGATAAGTTGAAGTTTCCAGATATCCTTTTGATGGTAATTTTCACTCTGAGTCTGAAGGCATGGGTTCTCATAGTTATGTGGTTTATCCTGGCCCCTGTTGCCCATAGATGGGATCTCGGACCTTTGTATATACTTGCAACTGGCTTTTGTCTCATTCTCTTCAATCTTGGAAAGCGTAAAGCTGGTGACTCCAGTGCATACTCTATCTTCAATGAAGACTTCAGAGAGCTTCCAGGAACACTGAATGCAGATCGGTTTGATAGAGATATAAGAGCAGGACAGTTTTGA 666 0.4159 MADIVEEDQSEKKVEIILKTIGPTPTSRLRVSSFIKVRDLRRLIASDGHLPIDNLSLILRGTALCDIKNGDDVHIQLNDGDSLIVAVKPKPPMKDGHDNDDDDEDLKFQLPHSSSRWKKRLYSFLHDKLKFPDILLMVIFTLSLKAWVLIVMWFILAPVAHRWDLGPLYILATGFCLILFNLGKRKAGDSSAYSIFNEDFRELPGTLNADRFDRDIRAGQF 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02254 221 Pfam Uncharacterized conserved domain (SAYSvFN) 150 216 IPR019387 -
Tsu04g02254 221 ProSiteProfiles Ubiquitin domain profile. 14 76 IPR000626 GO:0005515
Tsu04g02254 221 PANTHER UNCHARACTERIZED 14 221 IPR039159 -
Tsu04g02254 221 SUPERFAMILY Ubiquitin-like 11 92 IPR029071 -
Tsu04g02254 221 CDD Ubl_ubiquitin_like 26 75 - -
Tsu04g02254 221 Gene3D - 3 93 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02254 - - ccaj:109808509 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02254 04 25113601 25120393 Tsu04g02254 04 25113601 25120393 ECH