Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01441 atgacaaTAGCAAAGGCATACCAAATAGTAGTGATAGGAAACACTTGGggaatcaaaaacatatttcattCTCTTGTAGCAATCTTAACCACTCTTTTAGTTATTACAACCATTTATCTAACACAAGATAGAGGAgaaaaaatatctcaaaaaataaatatttctattGACTCATTGTCTTCATCAAAGTGTGACTTATTTTCTGGTAAGTGGGTTTTTGATAATGAAACTTATCCATTATACAAAGAGAAGCAATGCTCTTTCATGTCAGATCAATTGGCTTGTGAGAAGTTTGGAAGGAAGGACTTAAGTTACCAAAATTGGAGGTGGAAGCCTCACCAATGTGACTTGCCTAGGTTCAATGCCACAAAATTGCTTGAAAGGCTAAGGAACAAGAGGCTTGTTTTTGTGGGGGATTCACTCAACAGAGGTCAATGGGTTTCTATGGTTTGTCTTGTTGACTCTATAATACCTTCATCTCTCAAATCCATGCACTCCATTGCCAATGGTTCATTAAACATTTTCAAGATCAAAGAATACAATGCAACCATTGAGAATTACTGGTCACCATTACTAGTAGAATCAAATTCAGATGATCCAGTAAACCATAGGGTACCTGAAAGGACTGTTAGAATCAAGGCCATTGAAAAGCATGCAAAGTATTGGACTGATGCAGACTATATAGTTTTCAACACTTACCTTTGGTGGAGAAGGCCTCGTATGAATGCTCTGTGGGGATCATTTGGGGACCCAAATGGGGTTTATAAAAGAGTTGAAATGTTGAGAGTGTATGAAATGGCTATGAGGACATGGTCTGATTGGTTGGAAGTTCATGTTAATCGTAACAAGACCCAGTTGTTTTTTGTTAGCATGTCACCCACTCATGAAAgGGCTGAGGAATGGGGAGCTACTAAGGGTGATAATTGTTACAAAGAAACAGATATGATTGCAAAAGAAGGCTATTGGGGGAAAGGGTCTGATCCTAAAATGATGCAAGTGGTGGAGAATGTACTTGATGATTTGAAAACAAGAGGTTTGAATGTTCAAATGCTTAACATCACACAGCTCTCGGAATACAGAAAAGAAGGTCACCCATCTATATATAGGAAACAGTGGGAACCTCTAACTCAAGAACAGATATCAAATCCAAATGGTTATGCAGATTGCATACATTGGTGCCTACCAGGAGTTCCTGATGTATGGAATGAGCTCCTTTATGCATATATTTTCgatcaataa 1239 0.3656 MTIAKAYQIVVIGNTWGIKNIFHSLVAILTTLLVITTIYLTQDRGEKISQKINISIDSLSSSKCDLFSGKWVFDNETYPLYKEKQCSFMSDQLACEKFGRKDLSYQNWRWKPHQCDLPRFNATKLLERLRNKRLVFVGDSLNRGQWVSMVCLVDSIIPSSLKSMHSIANGSLNIFKIKEYNATIENYWSPLLVESNSDDPVNHRVPERTVRIKAIEKHAKYWTDADYIVFNTYLWWRRPRMNALWGSFGDPNGVYKRVEMLRVYEMAMRTWSDWLEVHVNRNKTQLFFVSMSPTHERAEEWGATKGDNCYKETDMIAKEGYWGKGSDPKMMQVVENVLDDLKTRGLNVQMLNITQLSEYRKEGHPSIYRKQWEPLTQEQISNPNGYADCIHWCLPGVPDVWNELLYAYIFDQ 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01441 412 Pfam PMR5 N terminal Domain 63 116 IPR025846 -
Tsu04g01441 412 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 117 407 IPR026057 GO:0016740
Tsu04g01441 412 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 9 411 IPR029962 GO:0016413
Tsu04g01441 412 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 9 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01441 Tsu-Chr4 14903122 14908828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01441 - - gmx:100785941 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01441 04 14903122 14908828 Tsu04g01441 04 14903122 14908828 ECH
Tsu06g00493 06 4164241 4166052 Tsu04g01441 04 14903122 14908828 PCT